Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00498 ATGGCGCTGTTCCGAAGGTTCTTTTATCGGAAACCACCGGATCGTCTTCTAGAGATCTCCGACAGGGTCTATGTTTTTGATTGTTGCTTCTCGACGGATGTGTTGGAAGAAGATGAGTTCAAAGTTTATATTGGGGGCATTGTTGCACAGCTGCAAGATTACTTTCCAGATGCTTCTTTCATGATGTTCAATTTCAGAGAAGGGGATAGGCGCAGCCAAATTTCAGACATATTGTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAATACGAGGGTTGTCCACTTCTGCCTTTGGAGATGGTTCATCACTTCCTTCGATCAAGCGAAAGCTGGCTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGGGGAGGTTGGCCCGTGCTGGCATTTATGCTAGCTGGTCTTTTGTTGTTCAGGAAACAATACAATGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCACCCAGAGAACTTCTCCACCTTTTATCACCTTTGAATCCACAGCCTTCTCACTTAAGATATCTTCAATATATTTCCAGGAGACATTTGAGTTCTGAGTGGCCTCCATCAGAAACACCCTTATATTTGGATTGTCTCATTCTTAGAGTCCTTCCATTATTTGATGGTGGAAAAGGCTGCAGGCCTGTTGTACGTGTTTACGGTCCAGACCCTTCAAAACCTGCCAATAGAAGTTCCACGCTTCTTTTCTCAACTTCAAAAACCCAAAAACATGTTCGCCACTACCTACAGGCAGAATGTATGCTCGTGAAAATAGATATCCATTGCCGTGTTCAAGGGGATGTCGTTCTTGAATGCATACATTTAAGTGAAGATTTCGTTCGTGAGGAGATGATGTTTAGAGTCATGTTTCATACTGCATTTGTACGGTCAAATATTTTGATGCTGAGCCGTGATGAAATTGATATTTTGTGGGATGCAAAGGATCAGTTCCCCAAGGATTTTAAATCTGAGGTGCTTTTTTTGGATGCTGATGCTGTTATACCTGATCTAACCACAGTCATTGTGAGTGGAGATGCAAATGAGACAGAAGGTGCTTCACCTGAGGAATTCTATGAAGCAGAAGAGATCTTCAGTAATGTAATTGATTCACAGGAAGGTAAGGGGGATTATGATTCTCCAATGGTTCATGACAATGCAGTAGGTGATGGAAGTCATAAAGAGGTCGGGGAAGAGTATTCAGATCCTCATACTTTTCAGGAGTCTATGCCAGATGATGCGATACGCCAACAGGTTGGAAGGATGGATTATGGTATTAATGCGGTGAAAGACGTTAATGTTGATGATGTGGAATATGGGCTTGATGACAGGGTGGATTTAGATACTCATGCAGTGAAAGATATTGCTGTGAATGACGGAGAAAATAAGTCAACTCCCACTTTTGATATGATGAAAACTCTGGAGACAAAAGAAGTCACTATGAATGTGCATAATGAGTTGGCAGTTATGCGAAACAAGTATGATGAAGATAACAATGCAACACAACAAGTAGAGTATGAGGAAGGGCAGCAGTTGCATGATCTTTCCAGATCAAAATCTGATAAACTACTTCCATCTGCAGAAAAGAAACAACTTCCTTCAAACTCTAAGCCAGTGGGAGATACAGTTGCAACAAAGCAAAATACTAAACACCATCATGACCCACACGCTTTTCAGGCAAAAGTAGCAAAATCAAATGCAACAACTAGGTGGATACCTTCTAACAAGGGTTCTTATGAAGATTCAATGCATGTCTCATATCCACCAACAAGGCATCATAATTTGCCGGCTGCTCTATCAAATGCCGCCTCTACAAAGGAGAAAATGACTGATGCCAAAGGAAGACCTATTTTTGATTCTCATGTCTCTGGAGCAGTTGTTTCTACGGACATGACAAATGACTTGAAAAGTTGTAATGGAGACCATTCAAAATCTTCAGACAGCATAACAGAAACAGACTCAAACTCTCCACTATCATCATTATTGTCAGTTAAAGAGACATCTCTTCAGTCAGCTACCCTAGCACCACAACCGAGCTCTGATCAAGTACAACAACCTCCACCTCCGCTTCTGCCTCCACCCATAGCACCATCTTCCTTGGATGGTAAGGGGTCTACTATACCACAGCCGCCACCGCTGCCACCTGCGATTGCTTCTCCTCCCCCTCCACCTCCACCTCCACCTCCACCTCCAATTTTTGGGCAAAATAGAGGGAGCAACTTACCTCCTCCTACCCATTGGAAGTCTGTTTATTCATCAATTGCCATAGATAGAGAGAATAGTGGTGCTTTACCTCCTCCTTCAACTCCTCCAATTGCAAGAAGTGCAATTGCATCAAAAGTTTCTGAATCACTTGGGGCAGTTTCCCTTTCTTGCCCTCCTCCACCACCACCACCTCCTCCTTCTCCAAAGTATAGAGTTACATCCATTCCTCCCCCTCCCCTTCCCCCTATGTCTTCTACAAATAGATCTCCACTCCCTCCTCCCTTAACACCCCCAACATCACTTAAAGCTCCACCTCTGGCACGCCCAACCCCACCATCACCACTTCCTCCTTTTTTATGTACACCTCCACCACCACCACCACCACCTCCTCTTCCTTTGTTTAGACCTCCACCACCATCACCTCCACCTTTTTTAAGTAGCACCCCACCACCACCACCTCCACCACCTTCACCTCCCTTCAATATGGCTCTATTGCTACCACCTCCTCCTAGTAGAGCACCTCCACCACCTCTTCCTCCATCAAGTGGAGCACCACCTCCTCCACCACCACCTCCACCACCTTCACCTCTTTTCAATATGGCTCCATTGCTACCACCTCCTCCTAGTAGAGCACCTCCACCACCTCTTCCTCCATCAAGTGGAGCACCACCTCCTCCTCCACCACCACCACCACTTCTTTCATCAAGTGGAGCACCACCTCCTCCTCCATCAAGTGGTGCACCACCACCACCACCACCACCTTTTCCTCCATCAAGTGGAGCACCACCTACTCCACCAGCACCAGCACCAGCACCACCACCTCCACCTCCTCCTCTATCAAGTGGAGCACCACCACCACCACCTCTTCCTCCATCAAGTGGAGCACCACCTCTACCACCACCTCCTTTAATGTCTACAGCCCCACCTCCCCCACCACCTCCAATTTGTGGAGCTCCACCACCACTAGCTACAATCCGTGGAGCACCACCACCTCCGCCGCCTCCAATGTGTGGAGCTCCCCCACCACCACCTCCTCCAATGTGTGTAGCTCCACCACCACCAGCTCCAATTCGTGGAGCACCACCTCCTCCACCACCTCCAGGTGGTCGAGGCCCACCTCCAGGTGGTCGAGGCCCACCTCCACCACCTCCTCCTCAAGCTCAGGCTCCTGGTGCTCCTGCTCCTCCCAGACCTCTAGGTGGTGGACCTCCACCACCTCCACCCTTTGGTTCTAAAGGTGCAGTTGGAGCTGATCCAAGAGGGAGAGGGCGTGGACTTGCACGTCCTACAGGTGCTGGTGCAATGGCGACTCGGCGATCCTCCTTAAAGCCTCTGCATTGGAGTAAGGTAACAAGAGCATTGCAAGGAAGTTTATGGGAAGAATTGCAAAGACATGAAGAGCCTCAAACTGCACAAGAGTTTGACGTTTCAGAGTTAGAGAAGCTTTTTTCTGCAAATGTTCCAAAACCTGCTGATTCTGGTGGGAAATCTGGAGGGAAGCGCAAATCTGTTGGATCCAAAACTGACAAAATCCACTTGATTGATCTAAGGAGAGCCTATAACATTGAAATTATGCTCACAAAGGTCAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCCATGGACGATTCGGTGTTAGATGTTGATCAGGTGGAAAATCTCATTAAATTTTGTCCTACCAAAGAGGAGATGGAACTTTTGAAGGGATTCACTGGTAACAAGGAGAATTTGGGAAAGTGTGAACAGTATTTTTTGGAGTTGATGAAAGCGCCACGAGTGGAGTCAAAATTAAGAGTATTCTCTTTCAAGATTCAGTTTGGGTCTCAGATTACAGAGTTTAAGAAGAGTTTAAACACAGTGAACTCTGCCTGTGAAGAGGTCCGAAATTCACTCAAACTAAAGGAGATTATGAAGAAAATCCTTTGTTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGACGGATAGTCTTTTAAAGCTCATTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGTCTCCTGGACTCCTTGATTTTCACCTTGACCTTGTTAGCCTGGAAACAGCCACTAAGATACAGTTGAAGTCATTGGCAGAAGAAATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAGACAGGAGCTTGCTGCTTGTGAAAATGATGGCCCCGTGTCTGAAGTTTTCCGTAAGAGATTGAAAGAATTCATTGCTGTAGCTGAGTCAGAGGTGGTATCTGTAACAAATCTATACTCTTCGGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCTTCCCGTTGTCCATTTGAGCAAGTTACTGCAACTCTCTTAAATTTTACAAAGATGTTTTGCAAAGCACATGAAGAGAATTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAAAAAGAGGCTCAAATGGAGAAGGCTAAAGGCGTTAACTTGACAAGGAAGAGTGGAAAAGATAAAGAAGAAGAAAGCTGA 4785 0.4579 MALFRRFFYRKPPDRLLEISDRVYVFDCCFSTDVLEEDEFKVYIGGIVAQLQDYFPDASFMMFNFREGDRRSQISDILSQYDMTVMEYPRQYEGCPLLPLEMVHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLFRKQYNGEQKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLSSEWPPSETPLYLDCLILRVLPLFDGGKGCRPVVRVYGPDPSKPANRSSTLLFSTSKTQKHVRHYLQAECMLVKIDIHCRVQGDVVLECIHLSEDFVREEMMFRVMFHTAFVRSNILMLSRDEIDILWDAKDQFPKDFKSEVLFLDADAVIPDLTTVIVSGDANETEGASPEEFYEAEEIFSNVIDSQEGKGDYDSPMVHDNAVGDGSHKEVGEEYSDPHTFQESMPDDAIRQQVGRMDYGINAVKDVNVDDVEYGLDDRVDLDTHAVKDIAVNDGENKSTPTFDMMKTLETKEVTMNVHNELAVMRNKYDEDNNATQQVEYEEGQQLHDLSRSKSDKLLPSAEKKQLPSNSKPVGDTVATKQNTKHHHDPHAFQAKVAKSNATTRWIPSNKGSYEDSMHVSYPPTRHHNLPAALSNAASTKEKMTDAKGRPIFDSHVSGAVVSTDMTNDLKSCNGDHSKSSDSITETDSNSPLSSLLSVKETSLQSATLAPQPSSDQVQQPPPPLLPPPIAPSSLDGKGSTIPQPPPLPPAIASPPPPPPPPPPPPIFGQNRGSNLPPPTHWKSVYSSIAIDRENSGALPPPSTPPIARSAIASKVSESLGAVSLSCPPPPPPPPPSPKYRVTSIPPPPLPPMSSTNRSPLPPPLTPPTSLKAPPLARPTPPSPLPPFLCTPPPPPPPPPLPLFRPPPPSPPPFLSSTPPPPPPPPSPPFNMALLLPPPPSRAPPPPLPPSSGAPPPPPPPPPPSPLFNMAPLLPPPPSRAPPPPLPPSSGAPPPPPPPPPLLSSSGAPPPPPSSGAPPPPPPPFPPSSGAPPTPPAPAPAPPPPPPPLSSGAPPPPPLPPSSGAPPLPPPPLMSTAPPPPPPPICGAPPPLATIRGAPPPPPPPMCGAPPPPPPPMCVAPPPPAPIRGAPPPPPPPGGRGPPPGGRGPPPPPPPQAQAPGAPAPPRPLGGGPPPPPPFGSKGAVGADPRGRGRGLARPTGAGAMATRRSSLKPLHWSKVTRALQGSLWEELQRHEEPQTAQEFDVSELEKLFSANVPKPADSGGKSGGKRKSVGSKTDKIHLIDLRRAYNIEIMLTKVKMPLPDMMAAVLAMDDSVLDVDQVENLIKFCPTKEEMELLKGFTGNKENLGKCEQYFLELMKAPRVESKLRVFSFKIQFGSQITEFKKSLNTVNSACEEVRNSLKLKEIMKKILCLGNTLNQGTARGSAVGFKTDSLLKLIDTRASNSKMTLMHYLCKVLAEKSPGLLDFHLDLVSLETATKIQLKSLAEEMQAIIKGLEKVRQELAACENDGPVSEVFRKRLKEFIAVAESEVVSVTNLYSSVGRNADALALYFGEDPSRCPFEQVTATLLNFTKMFCKAHEENCKQAELEKKKAEKEAQMEKAKGVNLTRKSGKDKEEES* 1595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00498 1594 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1175 1576 IPR015425 -
Rops10g00498 1594 MobiDBLite consensus disorder prediction 1228 1247 - -
Rops10g00498 1594 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 188 IPR029021 -
Rops10g00498 1594 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1252 1578 - -
Rops10g00498 1594 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Rops10g00498 1594 Gene3D - 205 336 - -
Rops10g00498 1594 SMART it6_source 688 1594 IPR015425 -
Rops10g00498 1594 MobiDBLite consensus disorder prediction 1566 1594 - -
Rops10g00498 1594 MobiDBLite consensus disorder prediction 689 704 - -
Rops10g00498 1594 SMART PTEN_C2_2 198 1228 IPR014020 -
Rops10g00498 1594 Coils Coil 1457 1484 - -
Rops10g00498 1594 MobiDBLite consensus disorder prediction 645 1183 - -
Rops10g00498 1594 MobiDBLite consensus disorder prediction 715 745 - -
Rops10g00498 1594 MobiDBLite consensus disorder prediction 516 564 - -
Rops10g00498 1594 PANTHER FORMIN-J 1 782 - -
Rops10g00498 1594 Coils Coil 1551 1580 - -
Rops10g00498 1594 Pfam Formin Homology 2 Domain 1181 1550 IPR015425 -
Rops10g00498 1594 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Rops10g00498 1594 Gene3D Formin, FH2 domain 1176 1562 IPR042201 -
Rops10g00498 1594 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Rops10g00498 1594 MobiDBLite consensus disorder prediction 518 534 - -
Rops10g00498 1594 MobiDBLite consensus disorder prediction 645 688 - -
Rops10g00498 1594 MobiDBLite consensus disorder prediction 798 1155 - -
Rops10g00498 1594 MobiDBLite consensus disorder prediction 537 553 - -
Rops10g00498 1594 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00498 Rops-Chr10 13197070 13220871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00498 1 618 FH2 protein (formin) Gene Family AT5G07740 60.925 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00498 - - lang:109327684 1102.04