Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00469 ATGCATTTCAAATCTTTTTTTTTTTGGAATTCTTGTGATGCGCATATCAATCTAATGCAAAAATTACCTGCGGAGCTTAGACATGGGAATTGGACTAATTGTTTGTGTTACTGTGATGCAGGAGGTTTGCTGGGATTGCTTGCTCCAAGTTTGCAGCTTGAGTTTTTGAGTTACTATCTTGTTGAGCTAAGCTTGTTGGACTATTATTGTTTGAAGTTCTTGCCTTCTTTGGTTTCCTCATCTATAATATCTTTTACTGGATTTATCTTTTGGCCAGAATCTTATCCTTGGTATACACATGAAGGGTCTCCTTTTCCAACTATTGTTGTTCACAGCCAAAATGAAGAGTACGGTATTATCATCCAAATCATTGTGAAAATTGTATGCAAGGTTCTTCCTGAACGACCTGCTCTTTGCATTGTTGAAGCTTTTGAGATGGGGGTTACTAACAAAGACTCCATTCCAGTTCTTGGATTATAA 480 0.3708 MHFKSFFFWNSCDAHINLMQKLPAELRHGNWTNCLCYCDAGGLLGLLAPSLQLEFLSYYLVELSLLDYYCLKFLPSLVSSSIISFTGFIFWPESYPWYTHEGSPFPTIVVHSQNEEYGIIIQIIVKIVCKVLPERPALCIVEAFEMGVTNKDSIPVLGL* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00469 159 Gene3D - 6 130 - -
Rops10g00469 159 Pfam Cyclin, C-terminal domain 51 86 IPR004367 -
Rops10g00469 159 SUPERFAMILY Cyclin-like 49 99 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00469 Rops-Chr10 12709785 12712310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00469 50 97 Core Cell Cycle Gene Families AT1G47230 54.167 1.61e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00469 K06627 - gmx:100776007 72.7886