Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00443 ATGGCTATGGCTGCTGCTCTACGACGTGAAGGGAAGCGTTTGGCTCCTCTCATTTCTCCCCAACCAATCAATTCCATTCGATCTTCTCCTGACCAAATCGCAAATGGAATCCGTTCTATTTCAACTCAAATTGTGAGGAACCGAATGAAGAGTGTGAAGAATATTCAGAAAATCACTAAGGCAATGAAGATGGTTGCTGCTTCAAAACTACGTGCCGTTCAAACTAGAGCTGAAAATTCACGTGGAGTTTGGCAGCCCTTTATGGCTCTTCTGGGTGACGCTTCTGGTGTTACTGTCAACAAGAATGTTGTTGTTACTGTTTCCTCCGACAAAGGTCTATGTGGTGGAATCAATTCCACAGCTGTCAAGATAAGCAGGGTTTTGCACAGATTGAATTCTGGGCCTGATAAAGAGACAAAGTATGTCATATTGGGAGAGAAGGCTAAGGCTCAATTGATTCGTGACTCGAAGAAAGACATTGTGCTGTCCTTAACTGAGTTGCAGAAAAATCCTCTGAATTATACCCAGGTGTCTGTCCTGGCAGATGACATTCTGAAGAATGTAGAGTTTGATGCATTAAGGATTGTTTTCAACAAATTTCATTCGGTTGTATCATTTCTGCCAACAGTGTCAACTGTACTATCTCCTGAGGTTGTTGAGAGAGAGGCTGAATCTGGAGGAAAGCTTGGGGAACTTGATTCCTATGAGATTGAAGGTGGCGAGACAAAATCAGAAGTCCTTCAGAATCTGGCTGAGTTCCAGTTTTCTTGTGTCATGTTCAACGCGGTGTTGGAGAATGCCTGCAGTGAGCAAGGAGCAAGGATGTCTGCCATGGACAGTTCTAGCAGGAATGCTGGAGAGATGCTTGATCGTCTTACCCTCACCTATAACAGAACTCGTCAAGCTTCAATCACCACTGAATTGACTGAGATTATCTCTGGAGCTTCAGCACTGACAGGCTAA 963 0.4403 MAMAAALRREGKRLAPLISPQPINSIRSSPDQIANGIRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGVWQPFMALLGDASGVTVNKNVVVTVSSDKGLCGGINSTAVKISRVLHRLNSGPDKETKYVILGEKAKAQLIRDSKKDIVLSLTELQKNPLNYTQVSVLADDILKNVEFDALRIVFNKFHSVVSFLPTVSTVLSPEVVEREAESGGKLGELDSYEIEGGETKSEVLQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELTEIISGASALTG* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00443 320 Gene3D - 65 277 - -
Rops10g00443 320 ProSitePatterns ATP synthase gamma subunit signature. 304 317 IPR023632 -
Rops10g00443 320 PANTHER ATP SYNTHASE GAMMA CHAIN 25 318 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops10g00443 320 PIRSF ATP_synthase_gamma 11 318 - -
Rops10g00443 320 Pfam ATP synthase 43 318 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops10g00443 320 FunFam ATP synthase gamma chain 273 315 - -
Rops10g00443 320 NCBIfam ATP synthase F1 subunit gamma 41 318 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops10g00443 320 CDD F1-ATPase_gamma 41 315 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops10g00443 320 Gene3D ATP synthase, gamma subunit, helix hairpin domain 45 315 - -
Rops10g00443 320 FunFam ATP synthase subunit gamma 65 277 - -
Rops10g00443 320 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 43 318 IPR035968 GO:0015986|GO:0045261|GO:0046933
Rops10g00443 320 PRINTS ATP synthase gamma subunit signature 99 118 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops10g00443 320 PRINTS ATP synthase gamma subunit signature 296 317 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops10g00443 320 PRINTS ATP synthase gamma subunit signature 191 208 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops10g00443 320 PRINTS ATP synthase gamma subunit signature 265 284 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00443 Rops-Chr10 12010083 12015997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00443 13 318 Primary Pumps ATPases AT1G15700 29.775 1.25e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00443 K02136 - zju:107419050 532.717