Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00432 ATGATGATGACGATGGAAAGTTCAAGAGAAGGTTATGAGGCAAAGCAAGAAGGTGATACCATTGATATTGAGAAGTTATCTAAGGCATTTTCTACTTCAAGACATTGGTCAGGTTTCAGAAATCCAAGAATTGTGAGGGTATCACGTTCTTTTGGAGGAAAAGATAGGCATAGCAAGGTTTGCACCATAAGAGGGTTAAGGGACAGAAGGATCAGGCTCTCAGTTCCAACAGCAATTCAGTTATATGATCTTCAACACAAGCTTGGTGTGAATCAACCAAGCAAGGTTATAGATTGGTTGCTTGAAGCCACTAAATTTGACATTGATAAGCTCCCTCCACTTCAATTTCCTCAGGGCTTTTCTCAATTTCATCAACAAACCCTACTTCCTTTTCATCAATCAAGTGCCTCTGAGCTTTCTCTTGGACCCTTCTATGAAGCCAATTCAACATTTTTAAGAGATGGGGGGATTCAAAATCACATGGCAAGGTCAAGGTTTTGGGACATGGATTCATTATCAAGAGTTAAAGGAAAAGAAGCTGAAAGAGAGTACATCTCAGAGAAAGGAAAGTGGATCAAAACAAATGATGAGCAAGAAAATCAAGATGGAGTAGGAGTAATGGGAGGTTACAATAACCTGCAGGTTTCAACTCAGAAGCTTTTCCCTATGGGCACTCACTCTCCTTTACCTGGGTTACCAAACAATGCCATGTCAGAGCCTGCTAGTATGTTTTTATCCCAATTTGGAAGCCATGGATTGTTTCATTCACTGGTAGATCCCCATCCAAACAGTGAAAATGGTGTGCAATTTCTATCTTCTTTGCCACTACCATCAGGTTCCCAATTATTGTTTGGTCCATCTCCTGCTACACCATCACTTTTTACTCCATTTATGACCACCACCTCATCATCAGTGGAAAATGATCCCAGACAATTCAACCATATTCAGTTCCTAAACTCAGGTTCTTCTCAACTCTTGCCTCACCATCCATCTCTTCATTCATTCAATTCAACTGTCAGACCCTTCCCTCCACCACCATTTAGCTCCAAGCTTCTTCTGGATTCAGAAAACAACAACAACCGTAGCCACCAACCAGATAAGGGTAGTAGTAGTAGTGCTCGTTCTTGA 1128 0.4113 MMMTMESSREGYEAKQEGDTIDIEKLSKAFSTSRHWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQHKLGVNQPSKVIDWLLEATKFDIDKLPPLQFPQGFSQFHQQTLLPFHQSSASELSLGPFYEANSTFLRDGGIQNHMARSRFWDMDSLSRVKGKEAEREYISEKGKWIKTNDEQENQDGVGVMGGYNNLQVSTQKLFPMGTHSPLPGLPNNAMSEPASMFLSQFGSHGLFHSLVDPHPNSENGVQFLSSLPLPSGSQLLFGPSPATPSLFTPFMTTTSSSVENDPRQFNHIQFLNSGSSQLLPHHPSLHSFNSTVRPFPPPPFSSKLLLDSENNNNRSHQPDKGSSSSARS* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00432 375 ProSiteProfiles TCP domain profile. 53 111 IPR017887 -
Rops10g00432 375 MobiDBLite consensus disorder prediction 346 375 - -
Rops10g00432 375 MobiDBLite consensus disorder prediction 351 375 - -
Rops10g00432 375 Pfam TCP family transcription factor 53 160 IPR017887 -
Rops10g00432 375 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 43 335 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00432 Rops-Chr10 11830960 11832865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00432 2 223 TCP Transcription Factor Family AT5G60970 47.737 6.72e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Rops10g00432 TCP 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00432 - - gmx:100788984 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03807 2 70314921 70316907 Rops10g00432 10 11830960 11832865 PCT