Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00431 ATGGCAGCAAAGCTTCTACATTCTTTAGCAGATGACAACTCAGATCTGCAGAAGCAGATTGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCACCATGTTCTCCCGGCTCGCCGGATTAGCCAGAAGAGGCTTCCTTCTGGTAATTCACACTTCAGGGATGGCATCTTGGAAAGAGATTCTAATATCATACACCATGGACAAACAGCATCTGATACGAGTTTAAACAAGGGTGTGAATGAAAAACAAAGAATTTCAACAGAATCATCAAGAGCATCATTCTCTTCTTGTTCGTCATCAGTGTCCTCTCTAGACTGTAAGGCTGAAGTAGAGGCTCCCTTTGACCGAATTCTTTTTCCCGAAACTCCTTCAAGGGACTCAGTTATGAACCAACCAACTATCTCTCCCCATTTAGGACGCCATTCTCTTGACCTGAGGGATGTGGTGAAGGATTCTATGTATAGGGAAGCCCGAGGATTGTCAGTGAAGGCTACATCCAAAGAGGAATCTGCCATTCATGCAATCAAGCACAGGGATTCACCACGACCTGTTCAGCCATCCAAAACTGTTGATGGATCTTATGGAGTTGAAATTGATGGAAAACAAAGTGTGCCTATTGATCTAAAGGAATCTATCCGAGTCCTTGCGAAACTTAGAGAAGCACCTTGGTATTATGCAGAAACTAGAGAACTTCCAAGATCATCACATGAAGTAAAAGATGGAAACCGGCTTTCCATCTCAAAAGATGCTCCTTGGTTTGCTTATGATGGAAGAGAAGTAAGTCGTTTATCTTTTGAATCAAGAGATACCATCAAATCCACACCAAAGCTAAAAGAGCTTCCTAGACTTTCACTTGATAGTAAAGAAAGTTCATGGCGCGCTTATAGCTCTGATTCAAAACAAAGTCACCTCTCAAGAAGCATTCATAGTGGTACCTCCACCTCAAATGAAAAATTCTCTAACCTACAACAATCAATGCAGAGTCGGCCACCTAGTGTTGTGGCGAAATTAATGGGCTTGGAAACATTACCGGATTCCTCTTCGGCTGGTGATACTCAATCAAGTTCAACTGAAACTTACTCAGCTCAAGATAATGATCGGTTTCCAAGATCATCAAAAAATGGATTCACTAGGCCACTCCAAGTTTCTAGTTCTCCAAAAAGTTCATTCAAAGATCCCTCTTCCCCAAGGAGGAAGAATCCTGATCTGGTTATGAAGCCAATCTCAAGTTCAAGGTTTCCAATTGAACCAGCACCATGGAAGCAGCAGGATACAAATAGAAGCTCTCAGAAACCAAGTTTAAGGTCCGTAAAAGCTCCAGCAACAACAACAGAATCATTTCCTTCAGTTTATAGTGAGATAGAGAAGAGATTGAAGGATCTTGAATTCAAACAATCTGGAAGGGATCTCAGAGCACTAAAACAGATACTGGAGGCAATGCAAGAAAAGGGGCTGTTAGAGAGCAGAAAAGAAGAACAAGGTCCAAATGTTGTTGGAAGTCAAAGTGGTTATGAACCAAAGGCTACCAATCTAATTCAAAATTCCAAGTCAGCAAGGCAACAAAATCCTAGGGGAAACAATTTCCTATCTTCAACAATCAATGGATCTGACTCAGCCAGGGCTTTTGAATCTCCAATAGTGATAATGAAACCGGCAAAACTTGTTGAGAAAACCGGGATTTCTACTTCTTCAGTCATTCCAATTGGTGGTTTTTCTTGTTCCAACAAACTCCAGAGTGATGGTGTATGTCTAGATAATAAAAGTGGCGCATCTTCTACTCGAGTAGCAAAAGATCAGTCTCCTAAAAGCATTCGCCGGGATGCTTCTGCAGGTTCCAATGATAAGAAAGCAAGTAGTGCCAAGACTACAAGATCAGCACAATCTCAATTGAGGTCTCCACAACTTCCTAAAGAAAATAGCCAAAGTTCAGTAAAACACACAGGAACTGTGAGCCCAAGATTACAACAGAAGAAGTTGGAGTTAGAGAAGAGATCTCGTCCTCCTACCCCACCATCAGATTCAAACAAGCCCAGAAGGCAATCTGGTAAGAAGACAACAGAATCAAGTTCTCCAGGTGGAAAACAAAGACCCAAAGTCCCCAACTCGCAGCATAGTGATGAGCAACTGAGTGAGATTAGCAATGAATCAAGAAGTTTAAGTTGCCAAGGGGATGAAACTTCTCTGCTATCAGACAGCATCACTGTCAACTCAACTATGGATATAGAAGTCACCAGTAGTTTGCAGTCTGCTGAAATTGATGACAGCCAAAGCCCATCCTTGAAGGCTATGAAGCAATTGGTTTCAGAAATCGTGAAGAAAAAATCAACTGTGAGGTTGGATGAGGATGAAACAATTGCAGAACTTGCGACAAATGTCCCGGAACTTCCAAGTCCTATCTCAGTTCTTGATGACTCAGTGTACAGAGATGATATGCCATCTCCAGTAAAGCAGATATCTGAAGATCCAAAAGCTGATAGTGCTCAAGAATCCAAAGAGAATGAGGTTAAAGATCAGTGGAATGTTGCAGAGAGCCTTTCATTCAATGGCACAGGATCTGGGGAGATTAATCGCAAGAAATTACAGAGCATAGATAACCTTGTTCAGAAACTTAGACAGTTGAACTCCAGTCATGATGAAGCTAGAACCGATTACATTGCTTCCCTATGTGAAAACACAAATCCAGACCACAGATACATCTCTGAAATATTACTAGCTTCAGGTCTCCTACTAAGAGATTTGAGTTCTGAATTGCTCACATTTCAACTTCACTCATCGGGTCATCCGATTAACCCCGAGTTATTCCTTGTCTTGGAGCAAACCAAGGCAAGTAGTTTGCTTTCCAAAGAAGAAAGCAGCCCTGGAAAAACTGCATACTTGAAGCTAAACACACAGAAATCTCACAGGAAACTCATCTTTGATGCTGTGAATGAAATTCTTGGTGCAAAATTAGGCTCCTCCCCTGAGCCATGGTTTCAGCCTAACTCTAACAGACTCACAAAGAAAACCCTCAATGCTCAAAAGCTTCTTAAAGAACTATGCTTTGAGATAGAAAAGATTCAAGCCAAGAAGCCAGAATGCTCCTTAGAAGATGAAGAGGATGGTCTTAAAAGTATGCTGTGGGAAGATGTGATGCATGGTTATGGCTCAGAATGTTGGACTAATTTCCATGGTGAAATACCTGGAGTTGTGTTGGATGTTGAGAGACTGATATTTAAGGACTTGGTGGATGAGATTGTGATAGGTGAATCAGCTGGTTTGAGAGTTAAGTCATCAGTTAGGCGCAGGAAACTGTTTGGAAAGTAG 3306 0.4162 MAAKLLHSLADDNSDLQKQIGCMTGIFQLFDRHHVLPARRISQKRLPSGNSHFRDGILERDSNIIHHGQTASDTSLNKGVNEKQRISTESSRASFSSCSSSVSSLDCKAEVEAPFDRILFPETPSRDSVMNQPTISPHLGRHSLDLRDVVKDSMYREARGLSVKATSKEESAIHAIKHRDSPRPVQPSKTVDGSYGVEIDGKQSVPIDLKESIRVLAKLREAPWYYAETRELPRSSHEVKDGNRLSISKDAPWFAYDGREVSRLSFESRDTIKSTPKLKELPRLSLDSKESSWRAYSSDSKQSHLSRSIHSGTSTSNEKFSNLQQSMQSRPPSVVAKLMGLETLPDSSSAGDTQSSSTETYSAQDNDRFPRSSKNGFTRPLQVSSSPKSSFKDPSSPRRKNPDLVMKPISSSRFPIEPAPWKQQDTNRSSQKPSLRSVKAPATTTESFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQGPNVVGSQSGYEPKATNLIQNSKSARQQNPRGNNFLSSTINGSDSARAFESPIVIMKPAKLVEKTGISTSSVIPIGGFSCSNKLQSDGVCLDNKSGASSTRVAKDQSPKSIRRDASAGSNDKKASSAKTTRSAQSQLRSPQLPKENSQSSVKHTGTVSPRLQQKKLELEKRSRPPTPPSDSNKPRRQSGKKTTESSSPGGKQRPKVPNSQHSDEQLSEISNESRSLSCQGDETSLLSDSITVNSTMDIEVTSSLQSAEIDDSQSPSLKAMKQLVSEIVKKKSTVRLDEDETIAELATNVPELPSPISVLDDSVYRDDMPSPVKQISEDPKADSAQESKENEVKDQWNVAESLSFNGTGSGEINRKKLQSIDNLVQKLRQLNSSHDEARTDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLTFQLHSSGHPINPELFLVLEQTKASSLLSKEESSPGKTAYLKLNTQKSHRKLIFDAVNEILGAKLGSSPEPWFQPNSNRLTKKTLNAQKLLKELCFEIEKIQAKKPECSLEDEEDGLKSMLWEDVMHGYGSECWTNFHGEIPGVVLDVERLIFKDLVDEIVIGESAGLRVKSSVRRRKLFGK* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00431 1101 PANTHER LONGIFOLIA PROTEIN 1 1099 IPR033334 GO:0051513
Rops10g00431 1101 MobiDBLite consensus disorder prediction 344 447 - -
Rops10g00431 1101 MobiDBLite consensus disorder prediction 292 332 - -
Rops10g00431 1101 Coils Coil 864 884 - -
Rops10g00431 1101 Pfam Domain of unknown function (DUF4378) 896 1078 IPR025486 -
Rops10g00431 1101 MobiDBLite consensus disorder prediction 68 93 - -
Rops10g00431 1101 MobiDBLite consensus disorder prediction 422 447 - -
Rops10g00431 1101 MobiDBLite consensus disorder prediction 685 727 - -
Rops10g00431 1101 Pfam DUF761-associated sequence motif 327 349 IPR032795 -
Rops10g00431 1101 MobiDBLite consensus disorder prediction 614 655 - -
Rops10g00431 1101 MobiDBLite consensus disorder prediction 587 727 - -
Rops10g00431 1101 MobiDBLite consensus disorder prediction 517 536 - -
Rops10g00431 1101 MobiDBLite consensus disorder prediction 797 836 - -
Rops10g00431 1101 MobiDBLite consensus disorder prediction 346 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00431 Rops-Chr10 11816824 11823112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00431 138 1100 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 47.624 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00431 - - gmx:100787391 1701.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00431 10 11816824 11823112 Rops10g00431 10 11816824 11823112 ECH
Rops2g03806 2 70294321 70299230 Rops10g00431 10 11816824 11823112 PCT