Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00426 ATGTCCAATTTTTTCCTAGTTGGTCTAGTTGTTGTTGGGTTCCACCTTGACCCAATTGAGCTTTTAAACAAAGTTGATATTTTTAAGGGTTTAGGGTTTCCGGGTGGTGAAATTTCTAAGGTTTTGGAAGGTTTTCCCAATGTGGTTGTTATGAGTGAAAAGGAAATTGTTTCTATGATTGAGTTTTTAGTTGAATTTAGGGTTCCCAGGGATGAGGTTGATCGAATTGTGAGCTTGTTTCCTAAGGTTTTGGGATTTGGGGTTGAAGATAAGTTGAAACCCTTGATTTGGGAATTGAAGGGTTTGGGATTTTCTCTACGTGAGGTTAGAAAAGAGATGGTGAGGGAGCCAAGGATTCTCGGAATGGAAATTGGGGAATTTTGGCGGTGTTTGCTGTTACTTGAGAGTTTGAAATACAGGGAAGTGATTAAAGATAGGATCTTTGGAGAGGGTTTGTTAAGGGCTTGTTTTGAAGTGAAATTGAGAGTTGATTGTTTGTGTTGTCATGGTTTGATTAGAAGGGATGCTTTTAAGGTATTATGGAAAGAACCCAGATTGATAACTTATGATTTGGAGAATATTGAAAGGAAGATTGAGTTTTTAGTGCATAAGATGAAGTTTAGTGTTGATTGTTTGATTAATGTTCCTGAATACTTGGGTGTGAATTTTGTGAAGCAGATTGTTCCTAGATACAATGTGATGGAGTATTTGAGAGGTAAAGGTGCAATTGGTTTTGAGGTTGGATTGAAGGACTTGATCAGGCCATCAAGGCTTAGATTTTACAATCTTTATGTGAAGCCCTACCCGGAGTGTGAAAAAATATATGGAAGATTTTCTGGGAGACTTGTTGTTAAAAGAAAGCATCCATCTGGACTATGGAAACTCTTTAAACCTCAGAAGTTCCCTGAAACTGATGAAGATGTGAAGAACATGAAGTCCTTCATGGATTCACTGGTGTAG 960 0.3781 MSNFFLVGLVVVGFHLDPIELLNKVDIFKGLGFPGGEISKVLEGFPNVVVMSEKEIVSMIEFLVEFRVPRDEVDRIVSLFPKVLGFGVEDKLKPLIWELKGLGFSLREVRKEMVREPRILGMEIGEFWRCLLLLESLKYREVIKDRIFGEGLLRACFEVKLRVDCLCCHGLIRRDAFKVLWKEPRLITYDLENIERKIEFLVHKMKFSVDCLINVPEYLGVNFVKQIVPRYNVMEYLRGKGAIGFEVGLKDLIRPSRLRFYNLYVKPYPECEKIYGRFSGRLVVKRKHPSGLWKLFKPQKFPETDEDVKNMKSFMDSLV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00426 319 Gene3D Transcription termination factor 3, mitochondrial 9 278 IPR038538 -
Rops10g00426 319 Pfam mTERF 162 259 IPR003690 GO:0003690|GO:0006355
Rops10g00426 319 Pfam mTERF 17 124 IPR003690 GO:0003690|GO:0006355
Rops10g00426 319 PANTHER CGI-12 PROTEIN-RELATED 17 268 IPR003690 GO:0003690|GO:0006355
Rops10g00426 319 SMART mt_12 74 105 IPR003690 GO:0003690|GO:0006355
Rops10g00426 319 SMART mt_12 110 140 IPR003690 GO:0003690|GO:0006355
Rops10g00426 319 SMART mt_12 177 208 IPR003690 GO:0003690|GO:0006355
Rops10g00426 319 SMART mt_12 209 243 IPR003690 GO:0003690|GO:0006355
Rops10g00426 319 SMART mt_12 39 69 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00426 Rops-Chr10 11674666 11675475 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops10g00426 mTERF 1.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00426 - - pcin:129319850 450.669