Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00425 ATGGGGTTAGGTGTAGCACTAAGAATAAACATACGTATTCTGCAAAACAGTTTCAATTTCAGTTTCTCCACAACTCCATCATCTCATTACAGAAAACAAATTTCACTTGCCAATCTCTTCCAAAGGTATGGTTTTCCCTCCTCCCAACTTCACTCCTTTCTCTCCCACAACCATTTTCTCCTCAATTCTCCTCTACCCGAATTACAAAAATCCCTTTCCACTCTCTTTTCCCTCCGAATTCCACAGAAAACTCTCATTTCCCTCATAATTGATTCCCCTGGTGTATTGGAACACCGTTTTCTCCAGAACTGGGAATCTCGTTTCAAGGAATTGAAATCCCTCGTTCCCAACCCTTCCCCTTTGATGATTGTTAACTTGTTGCAATGTTCTAGAAGGTTCCACCTTGACCCAGTTGAGCTTTCTAACAAAGTTGAGATTTTTAAGGGTTTAGGGTTTTCGGGTGCTGAAATTTCTAGGGTTTTGGAAGGTTTTCCCAATGTGGTTATTATGAGTGAAAAGGAAATTGTGTCTGTGATTGAGTTTTTAGTTGAATTTGGGGTACCCAAGGATGAAGTTGATCGAATTGTTAGTTTGTATCCTAGGGTTTTGGGATTTGGGGTTGAAGATAAGTTGAAACCCTTGATTTGGGAATTGAAGGGTTTGGGATTTTCTCTACGTGAGGTTAGAAAAGAGATGGTGAGGGAGCCAAGGATTCTGGGATTGGAAATTGGGGAATTTTCGCGGTGTTTGCTGTTACTTGAGAGTTTGAAATGCAGGGAAGTGATTAAAGAGAGGATCTTTGGAGAGGGTTTGTTAAGGGCTTGTTTTGAAGTGAAATTGAGAGTTGATTGTTTGTGTTGTCATGGTTTGATTAGAAGGGATGCTTTTAAGGTATTATGGAAAGAACCAAGATTGATAACTTATGATTTGGAGAATATTGAGAGGAAGATTGAGTTTTTAGTGCATAGGATGAAGTTTAGTGTTGATTGTTTGCTTGATGTTCCTGAATACTTGGGTGTGAATTTTGAGAAGCAGATTGTTCCTAGATACAATGTGATGGAGTATTTGAGAGGTAAAGGTGCAATTGGTTTTGAGGTTGGATTGAAGGACTTGATCAGGCCAACAAGGCTTAGATTTTACAATCTTTATGTGAAGCCCTACCCGGAGTGTGAAAAAATATATGGAAGATTTTCTGGGAAACTTGTAGTTAAAAGAAAGCATCCAGCTGGACTATGGAAACTCTTTAAACCTCAGAAGTTCCCTGAAACTGATGAAGATGTGAAGAACATGAAGTCCTTCATGGATTCACTGGTGTAG 1317 0.3933 MGLGVALRINIRILQNSFNFSFSTTPSSHYRKQISLANLFQRYGFPSSQLHSFLSHNHFLLNSPLPELQKSLSTLFSLRIPQKTLISLIIDSPGVLEHRFLQNWESRFKELKSLVPNPSPLMIVNLLQCSRRFHLDPVELSNKVEIFKGLGFSGAEISRVLEGFPNVVIMSEKEIVSVIEFLVEFGVPKDEVDRIVSLYPRVLGFGVEDKLKPLIWELKGLGFSLREVRKEMVREPRILGLEIGEFSRCLLLLESLKCREVIKERIFGEGLLRACFEVKLRVDCLCCHGLIRRDAFKVLWKEPRLITYDLENIERKIEFLVHRMKFSVDCLLDVPEYLGVNFEKQIVPRYNVMEYLRGKGAIGFEVGLKDLIRPTRLRFYNLYVKPYPECEKIYGRFSGKLVVKRKHPAGLWKLFKPQKFPETDEDVKNMKSFMDSLV* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00425 438 FunFam Transcription termination factor MTERF15 mitochondrial 172 394 - -
Rops10g00425 438 Gene3D Transcription termination factor 3, mitochondrial 172 398 IPR038538 -
Rops10g00425 438 PANTHER CGI-12 PROTEIN-RELATED 35 387 IPR003690 GO:0003690|GO:0006355
Rops10g00425 438 Pfam mTERF 281 373 IPR003690 GO:0003690|GO:0006355
Rops10g00425 438 Pfam mTERF 46 245 IPR003690 GO:0003690|GO:0006355
Rops10g00425 438 SMART mt_12 296 327 IPR003690 GO:0003690|GO:0006355
Rops10g00425 438 SMART mt_12 328 362 IPR003690 GO:0003690|GO:0006355
Rops10g00425 438 SMART mt_12 158 188 IPR003690 GO:0003690|GO:0006355
Rops10g00425 438 SMART mt_12 193 224 IPR003690 GO:0003690|GO:0006355
Rops10g00425 438 SMART mt_12 229 259 IPR003690 GO:0003690|GO:0006355
Rops10g00425 438 SMART mt_12 123 153 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00425 Rops-Chr10 11671476 11672792 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops10g00425 mTERF 3.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00425 - - pcin:129319850 592.423