Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00400 ATGCACAGTTTAGATCCTCCATATTCACATAATGATGTCAAACTGGGTAATGTTCTTACAACTCATAGCAAAGGAGAACCACCTCTTGCCATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGGAGGCAAATTCGCTCCCGATCGGAGGCATTGCAGTTGCAGGAGTGGGCATCTGAACATTGCTTTGCTCCTTTCCGTGCTCCTGAGCTGTGGGATTGTCCTAGCTATGCTGATATAGATGAGAGGACTGATATTTGGTCACTAGGATGCACCTTGTACGCGATAATATTTTGTATACTTGTTTACCGTCACCTGGCTAAATTTTGCAAGTATTTAGTTTCTCCATTTGAATATGCACTTGAAGAATCTGGTGGAAGCTTGCAATTGGTCATTGTAAATGCTCAGGTCAAATGGCTAGCTGGACCTAAAACTCCATACACAGAATCTGTTCATCAGTTTGTGACATGGACGCTTCAGCCCTAG 486 0.4403 MHSLDPPYSHNDVKLGNVLTTHSKGEPPLAILMDFGSARPARRQIRSRSEALQLQEWASEHCFAPFRAPELWDCPSYADIDERTDIWSLGCTLYAIIFCILVYRHLAKFCKYLVSPFEYALEESGGSLQLVIVNAQVKWLAGPKTPYTESVHQFVTWTLQP* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00400 161 SUPERFAMILY Protein kinase-like (PK-like) 1 107 IPR011009 -
Rops10g00400 161 Gene3D Transferase(Phosphotransferase) domain 1 1 161 - -
Rops10g00400 161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 8 20 IPR008271 GO:0004672|GO:0006468
Rops10g00400 161 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00400 161 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 161 - -
Rops10g00400 161 Pfam Protein kinase domain 9 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00400 Rops-Chr10 10977744 10984822 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Rops10g00400 Pkinase 1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00400 K08856 - vvi:100254141 262.692