Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00391 ATGGCTGGTGATGGTGGAAGGAAGAGGCAGCACTTTAGCAGAATCCATGCATCTCGTGGGAAAGCATCATTCAGAGGTGAGCATTCACTTATAGGAGGCCCTGGCTTCTCAAGGATAGTCTATTGCAATGAACCAGAATGTGGAGATGGCAGTGTTCTGAATTATGGCGACAATTATGTTAGAACTACTAAATATACACTTGCCAGTTTCCTTCCCAAGTCATTGTTTGAGCAATTCAGAAGGGTTGCCAATTTTTACTTCCTTGTCTGTGCAATCTTGTCTTTCTTCCCGGTCTCTCCTTACTCAGCCGTCAGCAATGTTGTTCCTCTTGTGGCTGTGGTAGCTGCTACAATGGGGAAAGAGGCCGTTGAGGATTGGAGGCGATTCAAGCAGGATATCGAGATGAATAACAGAAAGGTTAGAGTGCATCGTGGAGGTGGTGTTTTTGACTATTCTAAATGGAAGGATTTGAAAGTTGGGGACATAGTAAAGGTAGAAAAAGATCAATTTTTCCCTGCTGATCTCATCTTACTTTCATCAAGCTATGACAATGCAATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTTAAAGTGAAACAAGCACTGGAAGAAACTTCCAAGTTGCAAGAAGACTCTAGCTTTCAAAATTTCAAGGCTGTCATCAAATGTGAAGATCCAAATGCAAATTTATACTCTTTCATAGGCAGTATGGAGCTTGAAGATCAACTGTATCCTCTTGCACCTCAGCAGATACTGCTTAGGGACTCAAAGCTGAGGAACACGGATTTCATATATGGTGTGGTAATCTTTACAGGCCATGATACAAAGGTTATGCAGAATTCTACAGACCCTCCATCCAAGAGAAGCAAAGTCGAGAAACGGATGGATAAGATCATCTACTTTCTGTTCTTTATCCTATTTTTGATTTCTTTCATTGGTTCCATTTTCTTTGGGATTGCAACAAGAGAGGACCTTGAAAATGGAGTAATGAAGAGATGGTACCTCAGACCAGATGATACCACAATCTACTTTGATCCAAAGAGAGCACCAGTTGCGGCAATTCTGCATTTCTTGACTGCACTTATGTTGTATAGTTACTTGATTCCAATTTCTTTGTATGTCTCCATTGAAATTGTGAAACTTCTTCAAAGCATTTTCATCAACCAGGATGTGTATATGTATTATGAGGAAACTGACCAGCCAGCACATGCTCGTACCTCAAATTTGAATGAAGAACTTGGCCAAGTTGATACTATATTTTCAGATAAAACAGGAACTTTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGATTGCCTACGGACGAGGAGTTACAGAAGTTGAGAGAGCTCTAGCCAGGAGAACAGGATTACCTTTAGGTCAAGAGTTGTCAGAAGATGACAACGTTGTGGATATTTCTGAAACAAAGTCATCCATTAAAGGTTTTAACTTTGTTGATGAAAGGATCATGAATGGAAATTGGGTCAATGAACCTCATGCTAATGTAATCCAGAAATTCCTGCGGTTGTTGGCAGTATGCCATACTGCAATACCTGAAGGTGATGAAGAAACTGGTAAAGTTACATATGAAGCTGAGTCACCTGATGAGGCAGCTTTTGTAATTGCAGCTAGAGAACTTGGATTTGAGTTTTATGAAAGAACACAGACAACTATTTCGCTGCGTGAATTCAATTCCATATCAGGCAAGACAATTGAAAGGTCCTACAAACTTTTAAATATATTAGAGTTTAGTAGTGCAAGAAAGCGGATGTCTGTAATTGTAAGAGATGAGGAGGGGAAACTACTACTACTCAGCAAAGGTGCTGACAGTGTCATGTTTGAACGACTAGCAAAGAATGGAAGGGAGTTTGAAGAGAAGACCAAGCAGCACATTAATGAATATGCTGATGCTGGTTTGAGAACCTTGATACTTGCATATCGTGAACTTGATGAGGAAGAGTACAATCTATTCAATATAGAATTCATGGAAGCCAAGAACTTAGTGAGTGCAGATCGGGAACAGATTGTAGAGGAAATATCAGAAAAGATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCAGGAATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAAACAGCAATCAATATTGGGTTTGCTTGTAGTTTACTCAGACAAGGAATGAAGCAAATTATGATTAGTTCAGACACTCCAGAAACCAAATCACTGGAGAAAATGGAGGACAAGTCTGCTGCTGCAGCGGCAATTAAGGAAAGTGTTCTTCGTCAATTAAGGGAAGGAAAGGCATTACTTGCTGCATCTGATGAAAACTCTGAGGCATTAGCTCTGATCATTGATGGGAAGTCTCTCACTTATGCACTAGAAGATGATGTAAAGGACTTGTTTCTTGTACTTGCCGTTGGTTGTGCATCTGTTATATGCTGTCGTTCATCTCCAAAGCAGAAAGCACTTGTTACTAGACAAGTAAAGATTATAACGGGTAGTACTACTCTAGCAATTGGTGATGGAGCAAATGATGTTGGAATGCTCCAAGAAGCAGATATTGGGATTGGTATCAGTGGTTTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCCCAATTTCGGTTTCTAGAGCGTCTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATTTGCTACTTCTTTTACAAGAATATTGCCTTTGGTTTCACTCTATTCTTCTATGAGATCTATGCCTCATTCTCGGGGCAAGCTGCATACAATGATTGGTTCTTGTCACTATATAACGTATTCTTCACTTCCCTTCCTGTAATTGCCTTGGGAGTGTTTGACCAGGATGTCTCTGCTAGATTATGTCTCAAGTTCCCGTTGTTATATCAAGAAGGTGTACAAAACGTCCTATTTAGCTGGACACGAATCCTTGGTTGGGCATTCAATGGAGTCTTGAGTGCTACCATTATATTCTTCTTCTGCATCAATGCAATGGAGAATCAAGCATTCCGTAAAGGAGGGGAAGTTGTTGGGCAGGAAGTTCTTGGTGCCACCATGTACACTTGTGTTGTGTGGGTGGTGAATTGCCAAATGACATTATCTATCAATTATTTCACTTACATACAACATATATTCATCTGGGGTGGTATTCTTTTTTGGTATATATTCCTCTTAGCATATGGAGCCATGGACCCTTCCCTATCTACCACTGCCTATAAGGTCTTCATTGAAGCTTGTGCACCAGCACCATCTTACTGGCTCATCACTATGCTTGTGCTTGTTGCTTCACTCCTTCCATATTTTACCTATGCTTCAATCCAAATGAGGTTCTTCCCTATGTTCCATCAAATGATACAATGGATACGAAATGATGGGCTAGCAACTGACCCAGAATACATCAATGTTGTGCGACAGAGATCAATAAGACACACAACAGTTGGTTTTACAGCTCGTTTCGAAGCATCCAGGACCTTTGAAGTCTGA 3567 0.4026 MAGDGGRKRQHFSRIHASRGKASFRGEHSLIGGPGFSRIVYCNEPECGDGSVLNYGDNYVRTTKYTLASFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVVPLVAVVAATMGKEAVEDWRRFKQDIEMNNRKVRVHRGGGVFDYSKWKDLKVGDIVKVEKDQFFPADLILLSSSYDNAICYVETMNLDGETNLKVKQALEETSKLQEDSSFQNFKAVIKCEDPNANLYSFIGSMELEDQLYPLAPQQILLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKVEKRMDKIIYFLFFILFLISFIGSIFFGIATREDLENGVMKRWYLRPDDTTIYFDPKRAPVAAILHFLTALMLYSYLIPISLYVSIEIVKLLQSIFINQDVYMYYEETDQPAHARTSNLNEELGQVDTIFSDKTGTLTCNSMEFIKCSIAGIAYGRGVTEVERALARRTGLPLGQELSEDDNVVDISETKSSIKGFNFVDERIMNGNWVNEPHANVIQKFLRLLAVCHTAIPEGDEETGKVTYEAESPDEAAFVIAARELGFEFYERTQTTISLREFNSISGKTIERSYKLLNILEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLAKNGREFEEKTKQHINEYADAGLRTLILAYRELDEEEYNLFNIEFMEAKNLVSADREQIVEEISEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIMISSDTPETKSLEKMEDKSAAAAAIKESVLRQLREGKALLAASDENSEALALIIDGKSLTYALEDDVKDLFLVLAVGCASVICCRSSPKQKALVTRQVKIITGSTTLAIGDGANDVGMLQEADIGIGISGFEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEIYASFSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWTRILGWAFNGVLSATIIFFFCINAMENQAFRKGGEVVGQEVLGATMYTCVVWVVNCQMTLSINYFTYIQHIFIWGGILFWYIFLLAYGAMDPSLSTTAYKVFIEACAPAPSYWLITMLVLVASLLPYFTYASIQMRFFPMFHQMIQWIRNDGLATDPEYINVVRQRSIRHTTVGFTARFEASRTFEV* 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00391 1188 NCBIfam phospholipid-translocating P-type ATPase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Rops10g00391 1188 SFLD C1.7: P-type atpase like 406 913 - -
Rops10g00391 1188 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Rops10g00391 1188 MobiDBLite consensus disorder prediction 1 20 - -
Rops10g00391 1188 FunFam Phospholipid-transporting ATPase 116 286 - -
Rops10g00391 1188 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Rops10g00391 1188 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Rops10g00391 1188 PRINTS P-type cation-transporting ATPase superfamily signature 748 758 - -
Rops10g00391 1188 Gene3D - 699 902 IPR023214 -
Rops10g00391 1188 NCBIfam HAD-IC family P-type ATPase 828 945 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops10g00391 1188 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 24 1151 - -
Rops10g00391 1188 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Rops10g00391 1188 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1140 IPR023298 -
Rops10g00391 1188 FunFam Phospholipid-transporting ATPase 540 698 - -
Rops10g00391 1188 SFLD p-type atpase 406 913 IPR044492 -
Rops10g00391 1188 Gene3D - 568 698 IPR023299 GO:0000166
Rops10g00391 1188 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Rops10g00391 1188 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 484 700 IPR023299 GO:0000166
Rops10g00391 1188 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Rops10g00391 1188 SUPERFAMILY HAD-like 419 917 IPR036412 -
Rops10g00391 1188 FunFam Phospholipid-transporting ATPase 698 902 - -
Rops10g00391 1188 Pfam E1-E2 ATPase 135 344 - -
Rops10g00391 1188 Pfam Cation transport ATPase (P-type) 520 624 - -
Rops10g00391 1188 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
Rops10g00391 1188 Gene3D - 104 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00391 Rops-Chr10 10764962 10773087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00391 20 1184 Primary Pumps ATPases AT1G68710 71.596 0.0 1806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00391 K01530 - gmx:100777629 2093.93