Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00381 ATGGACGCGCTACGCGCCTCGCGGGCCGTCACCGACCCCAAAGTTAGGCACGTCGGTTTCTTCGCTCCTGACCCGCCCGAACCCAATTCCCCACCGCCACGTCATCTTTCCGAGCGAACAGCCGCCGTTCCAGTCCCCGAGACCGGTGTCCGGCGCCAGGTGTCCGGAGATATTCAAATCGGAAGCTACAACCCCGCCGATTCGCTGCTCGGAACCTCGCCCACAGCGTCGCCTTCTTCGAACGGTGCCGGAATCATCGGTGGAGAGTTCTCTGAGGATTGTTCCGACGGCGCCGGCTGGTTCCGTGGTAGCAACTCGAGTTTCCCCGGTGGAGAGATCAATTTGCCGGCCGTGAAGCCACCGGAAAATTCATCGGAGAACAGCTTAGCTCTGGCGGTGAATATGAAAAATCTTCCAGAAGAAAAGAGGGAAGAGGTTGTCAAAGAAGTACGCCCTGATCTGTCATCAATTTCAAAGCCACTGAAAGAAAAAGCTACAAAGGCGGAGAGACGAGCCTTGCAGGAGGCACAAAGAGCTGCAAAAGCTGCTTCTAAAGCCGATGGAAGGACAGCAGTTGCTGAATCTGGCAGAGCAGGTCCAGGTAAAAGTATGAAGCAGACTTCACAAAAGAAAGATGGTACTCCTGTTACATCCTCAGTGGCTACTGATAAGAAATCTGGGGATCGTCCTCCGGAGAAAGAGAGGAAAAAAGATGCTCCTCCTCCACGATTGCAATATGATGACAAGAACAGAGTGGAAAAGGCTAAAAGACGTGCAATAGTCAATCAAACTGAAGCTAGAAACAGAGTTGAATTATTTCGGCATTTGCCTCAATATGAACATGGGACTCAGCTTCCTAAACTTGAATCAAAGTTTTTCCAACTTGATTCAGTGCATCCTGCTGTGTTCAAGGTTGGCTTGCGTTATTTGGCTGGAGATATATCGGGGGGGAATGCTCGTTGTATTGAAATGCTTAGAGCACTTCGGGAAGCCATTATGGACTACTCCACACCGCCTGAAAAAGTCCTTATTAGGGATTTAACTTCAAAATTCAGTGGTTATGTTTCATTTTTTACCGAATGCAGACCACTTTCTGTTGGTATGGGAAATGCAATTAGGTTTCTAAAGAGTCGTATTGCCAAGTTGTCTTTAAGTTATACTGAATCTGAGGTAAAATCAGCTCTTTGTTCTGATATTGACCGATTCATTAATGAAAAAATAATTATTGCTGATAAGGTGATTGTTAGCCATGCTGCTACAAAGGTTAGGGATGGAGATGTTCTTCTTATATATGGATCATCTTGCGTTGTTGAGATGATTCTTTTATATGCCCATGATCTTGGGAAACAATTCCGAGTTGTGGTGGTAGACTCACGACCAAAGTTTGAAAGTCAGGCCCTACTTCGTAGGCTGGTGGCCAAGGGCCTGAGTTGTACATATACTCATATAAATGCTGTTTCTTATATCATGCATGAGGCCACACGAGTTTTTCTGGGAGCTTCTGCCATTCTGTCAAATGGAACTGTATATTCTCGGGTTGGGACTGCATGTGTTGCAATGGTGGCTCATGCATTTCATGTTCCTGTAATAATCTGTTGTGAAGCTTATAAGTTTCATGAACGGGTGCAACTTGATTCAATATGTTCCAATGAACTAGGTGACCCAGATGCTGTTGCCATGGTTCCTGGAAGAATGAATGTCAATTATCTGAACAATTGGACTAGTGAAGAGAATTTGCAGCTTTTGAATTTGATGTATGATGCTACTCCTTCTGATTATGTCTCGGCTATTGTTACGGATCATGGAATGATCCCTCCTACAAGTGTGCCCGTAATTGTACGCGAGTATGGACGAGAGCACTTGATATAG 1869 0.4585 MDALRASRAVTDPKVRHVGFFAPDPPEPNSPPPRHLSERTAAVPVPETGVRRQVSGDIQIGSYNPADSLLGTSPTASPSSNGAGIIGGEFSEDCSDGAGWFRGSNSSFPGGEINLPAVKPPENSSENSLALAVNMKNLPEEKREEVVKEVRPDLSSISKPLKEKATKAERRALQEAQRAAKAASKADGRTAVAESGRAGPGKSMKQTSQKKDGTPVTSSVATDKKSGDRPPEKERKKDAPPPRLQYDDKNRVEKAKRRAIVNQTEARNRVELFRHLPQYEHGTQLPKLESKFFQLDSVHPAVFKVGLRYLAGDISGGNARCIEMLRALREAIMDYSTPPEKVLIRDLTSKFSGYVSFFTECRPLSVGMGNAIRFLKSRIAKLSLSYTESEVKSALCSDIDRFINEKIIIADKVIVSHAATKVRDGDVLLIYGSSCVVEMILLYAHDLGKQFRVVVVDSRPKFESQALLRRLVAKGLSCTYTHINAVSYIMHEATRVFLGASAILSNGTVYSRVGTACVAMVAHAFHVPVIICCEAYKFHERVQLDSICSNELGDPDAVAMVPGRMNVNYLNNWTSEENLQLLNLMYDATPSDYVSAIVTDHGMIPPTSVPVIVREYGREHLI* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00381 622 MobiDBLite consensus disorder prediction 15 50 - -
Rops10g00381 622 SUPERFAMILY NagB/RpiA/CoA transferase-like 308 616 IPR037171 -
Rops10g00381 622 MobiDBLite consensus disorder prediction 137 176 - -
Rops10g00381 622 MobiDBLite consensus disorder prediction 65 84 - -
Rops10g00381 622 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 121 620 - -
Rops10g00381 622 MobiDBLite consensus disorder prediction 201 224 - -
Rops10g00381 622 Gene3D - 409 616 IPR042529 -
Rops10g00381 622 MobiDBLite consensus disorder prediction 65 89 - -
Rops10g00381 622 MobiDBLite consensus disorder prediction 225 255 - -
Rops10g00381 622 MobiDBLite consensus disorder prediction 136 255 - -
Rops10g00381 622 Pfam Initiation factor 2 subunit family 314 606 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00381 Rops-Chr10 10655174 10661862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00381 159 622 Eukaryotic Initiation Factors Gene Family AT5G38640 69.602 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00381 K03680 - gmx:100778711 914.835