Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00360 ATGAGAGATGAGGGCCCTGAAAGAGGGAATGTGGTCGATGAGGCAATCAAAGACCCTCAAGATCTGCGCCAATCATCTCAGGCACTTCTTGATTATGAAAGGTATAAAATAAAAGGTGGCGAGCTGAATGTGCCTATTGTTTCCCATCCAGAGCCTATGAATATTGAAAATCAAGCTTCAGCATCAGGTAGAGCCCGGAGAGATGCTGCAGCACGAGCTATGCAGGGTTGGCACTCTCAACGCAGCACGCAAATGGATACAGCTGTGGTTGATATTGGACCTCCTGCAGATTGGGTAAAAATCAATGTACAGAAAACTAAAGATTGTTTTGAGGTATATGTTTTAGTTCCAGGCCTTCTGCGGGAAGAGAATATTGGGAGTCAACTTGGTAATGGAAGAGAAGAAGATGCACATGAATTTCTAAGTCAACTACTTGCTCCCAGGAAATTGCCTGCTGAATCCCAGACAGGAAGATCCAGTTTTCATAAGCTTTTGGAGTCAAAGCTCCCTCAACTTCCAGGAATTGCTCCTTACAGAGTTGTCCTGGGGAATGTAAAGGATAAGCTTGAGAGAAACCGAAGACGGTTAGAACTTCTTCTTGAGGATGTTCAATGTGATTATGATCCTTTAGATTACTATGAAACATCTGATCAGCTTTTGGAACCTCTGCTCCTCTGTTATGAATCTCTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTGCTGATCTGATTCGTAGAGTTGCTACTTTCGGAATGGTGTTAATGAAGCTTGACTTGCGTCAGGTTCCTCCTGATGTTAAAGAAGTCTTGGAGACATTCCGAATTGCTGCTGAACTAGGGAGTGATTCACTTGGAGCCTATGTGATCTCTATGGCCTCAAATGCAAGTGATGTCCTTGCAGTAGAGCTTTTACAGAAGGACGTGCGGCTTGTCACTCTTTGGGGAGTTGGGAGGAGCATGTCCTGGTGGAACGTAAGTATGGAACCTTAG 999 0.4474 MRDEGPERGNVVDEAIKDPQDLRQSSQALLDYERYKIKGGELNVPIVSHPEPMNIENQASASGRARRDAAARAMQGWHSQRSTQMDTAVVDIGPPADWVKINVQKTKDCFEVYVLVPGLLREENIGSQLGNGREEDAHEFLSQLLAPRKLPAESQTGRSSFHKLLESKLPQLPGIAPYRVVLGNVKDKLERNRRRLELLLEDVQCDYDPLDYYETSDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQVPPDVKEVLETFRIAAELGSDSLGAYVISMASNASDVLAVELLQKDVRLVTLWGVGRSMSWWNVSMEP* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00360 332 Pfam Phosphoenolpyruvate carboxylase 167 264 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops10g00360 332 Pfam Phosphoenolpyruvate carboxylase 267 314 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops10g00360 332 Coils Coil 182 206 - -
Rops10g00360 332 Gene3D Phosphoenolpyruvate/pyruvate domain 135 255 - -
Rops10g00360 332 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 160 314 IPR015813 GO:0003824
Rops10g00360 332 MobiDBLite consensus disorder prediction 1 20 - -
Rops10g00360 332 FunFam Phosphoenolpyruvate carboxylase 1 135 256 - -
Rops10g00360 332 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 265 315 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00360 Rops-Chr10 10051908 10057317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00360 27 123 ARID Transcription Factor Family AT1G76510 43.333 1.57e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00360 K01595 - gmx:547755 256.144