Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00359 ATGAAGGACCCAGAAGAGCATCAAGTGAAATCTAGAAGGCTTCTCCAGAAACCTACAGAACATAGAATAAAGGGTAGAAGAAGAAACCAAAGCAAGCAAGATAAATCACAAGAAACAGGACTTGATTCACAACTTGTTTCCTCTGCTACTTCCAAGAGTCTTGTGTTCCCTCGCAGGCCTGGCTATGGACAACTTGGGACTAAGTGTCTTATCAAAGCTAACCACTTCCTTGCAGATATATCAGTGTCTGATTTGAGCCATTATAATGTTAAAATAACACCTGAAATCACTTCTCGTAAAACAAGCAAGGCTATCATATCAGAGCTTGTGAGGCTTCATAGGAACACTGACTTGGCCATGAGGCTCCCTGTGTATGATGGAGGGAGAAATCTTTACACTGCTGGTTTGCTTCCTTTCACATACAAAGAGTTCAATGTAATATTGAGTGAGGATGATGATGTTACTGGTAGTACCAGGGAAAGAGAATTTAAGGTGGTAATCAAGTTTGCAACTCGTGTTAGCATGCAACAACTTCGGGATCTTCTTAGTGGGAAACAAGTGGACACCCCACAAGAAGCACTTAGCATTTTTGACATTGTTTTAAGGAGCTTGCAACTCAGAGTTACGTATCAATTGGGAGGTTTCTCTATTCTCCCGATGTAA 663 0.4118 MKDPEEHQVKSRRLLQKPTEHRIKGRRRNQSKQDKSQETGLDSQLVSSATSKSLVFPRRPGYGQLGTKCLIKANHFLADISVSDLSHYNVKITPEITSRKTSKAIISELVRLHRNTDLAMRLPVYDGGRNLYTAGLLPFTYKEFNVILSEDDDVTGSTREREFKVVIKFATRVSMQQLRDLLSGKQVDTPQEALSIFDIVLRSLQLRVTYQLGGFSILPM* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00359 220 MobiDBLite consensus disorder prediction 1 45 - -
Rops10g00359 220 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 40 205 - -
Rops10g00359 220 MobiDBLite consensus disorder prediction 1 18 - -
Rops10g00359 220 Pfam N-terminal domain of argonaute 68 201 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00359 Rops-Chr10 10038296 10046722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00359 56 207 Eukaryotic Initiation Factors Gene Family AT5G43810 55.195 1.43e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00359 K11593 - gmx:100808457 326.635