Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g00347 | ATGGAAAAGAAAAGAGCTACTGTTCCTCTTGTGTGTCATGGTCACTCTCGTCCCGTGGTTGATCTGTTTTACAGTCCCATTACTCCTGATGGATTCTTCCTTATCAGCGCAAGCAAAGATGCTAATCCTATGCTGAGGAATGGAGAGACAGGAGATTGGATTGGAACTTTTGAAGGGCACAAAGGTGCTGTATGGAGTTGCTGCTTGGATACAAATGCTTTGCGTGCTGCAACTGCTTCTGCGGATTTCTCATCCAAAGTTTGGGATGCGTTAACCGGAGATGAGTTACATTCTTTTGAACATAAGCACATTGTTAGAGCATGTGCTTTTTCTGAGGATACACACCTTTTGCTCACTGGGGGAGCAGAGAAAATTCTCCGAATTTATGATTTGAATCGGCCTGATGCACCACCCAGAGAAGTGGATAAATCCCCTGGTTCTGTCAGGACCATTGCATGGCTTCACAGTGACCAGACAATATTGAGTTCTTGTACTGATATGGGAGGTGTCAGGTTATGGGATGTAAGAACTGGTAAAATGGTCCAGACACTTGAGACCAAGTCATCTATGACTAGTGCTGAAGTGAGCCAGGACGGTCGTTATATTACAACTGCTGACGGTTCTACTGTGAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGACATGCCCTGTGCTGTGGAATCAGCTTCATTGGAGCCCAAGTATGGGAACAAGTTCATTGCTGGGGGAGAAGACATGTGGGTTCGTGTTTTTGATTTCCACACTGGCAATGAGATTGCATGCAACAAGGGTCATCATGGTCCGGTACACTGTGTCCGTTTCTCTCCTGGAGGAGAATCATATGCCTCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACAGGGCCATTGACTTGTGATGAATCCGAGGCTTTATCCTCAAATGGATCAGTGGAAAGAGTGAAGGTAACTGCTGAAGAGGTTTCGCACAAAATTGAAGGTTTTCATATTGCAGAGGAGGCCAAGTCCGATGATAAGGAAGAGGCGCTGGAGGAATTATGA | 1056 | 0.4555 | MEKKRATVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDANPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATASADFSSKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGAEKILRIYDLNRPDAPPREVDKSPGSVRTIAWLHSDQTILSSCTDMGGVRLWDVRTGKMVQTLETKSSMTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCAVESASLEPKYGNKFIAGGEDMWVRVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTCDESEALSSNGSVERVKVTAEEVSHKIEGFHIAEEAKSDDKEEALEEL* | 352 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g00347 | 351 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 266 | 298 | - | - | |
Rops10g00347 | 351 | SUPERFAMILY | WD40 repeat-like | 5 | 305 | IPR036322 | GO:0005515 | |
Rops10g00347 | 351 | Gene3D | - | 9 | 326 | IPR015943 | GO:0005515 | |
Rops10g00347 | 351 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 98 | 132 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | FunFam | Serine-threonine kinase receptor-associated protein | 8 | 322 | - | - | |
Rops10g00347 | 351 | Pfam | WD domain, G-beta repeat | 54 | 89 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | Pfam | WD domain, G-beta repeat | 265 | 297 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | Pfam | WD domain, G-beta repeat | 94 | 130 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | CDD | WD40 | 14 | 298 | - | - | |
Rops10g00347 | 351 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 57 | 98 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I | 7 | 340 | - | - | |
Rops10g00347 | 351 | Coils | Coil | 334 | 351 | - | - | |
Rops10g00347 | 351 | SMART | WD40_4 | 50 | 89 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | SMART | WD40_4 | 5 | 47 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | SMART | WD40_4 | 92 | 130 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | SMART | WD40_4 | 217 | 256 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | SMART | WD40_4 | 259 | 298 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | SMART | WD40_4 | 177 | 214 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | SMART | WD40_4 | 134 | 174 | IPR001680 | GO:0005515 | |
Rops10g00347 | 351 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 266 | 298 | IPR001680 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g00347 | Rops-Chr10 | 9787463 | 9791937 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g00347 | 9 | 296 | Eukaryotic Initiation Factors Gene Family | AT2G46290 | 30.503 | 9.64e-41 | 144 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g00347 | K13137 | - | gmx:100818422 | 655.981 |