Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00345 ATGGCAGCCCCTACGCCGTTGGCCTTGGTTGCAGTGTTGCTCTGGTGGAGACCTAGAAAAATTGAAAGACATTTCTCTAAGCAAGGAATTAGAGGACCCCCTTATCAATTCTTCATTGGAAATGTAAAAGAAATTGTGGGGATGATGTTGAAGGCTTCCTCTCAACCCATGCCTTTTTCTCACAACATTCTCCCAAGAGTCCTTCCCTTCTATCATCACTGGAAGAAAATTTATGGTGCAACATTCCTTGTTTGGTTTGGACCCACTGTTCGAGTCACCATCTCTGATCCAGACCTTATCCGAGAAATCTTTACCTCAGAATTGTATGAGAAAAATGAAGCTCCCCCACTTGTAAGGCTGCTAGAAGGTGATGGACTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCATAGAAGAATCATCTCTCCCACTTTTCACATGGAAAATCTCAAACTTTTGATACCGATGATTGCAACAAGCGTGGTTGAGATGCTGGATAAGTGGGCAGCAATGGCCGAGAAGGGTGAGGTGGAAATCGAAGTTTCAGAGTGGTTTCAAACCCTAACAGAAGATGTCATTACCAGAACAGCATTTGGAAGCAGCTACCAAGATGGCAAAGCCATTTTTCAGCTACAAGCCCAACAAATGGCCTTAGCAGCTGATGCCTTCCAAAAAGTATTCATCCCAGGCTATAGATTCTTTCCCACGAGGAGGAATATAAGGTCTTGGAAATTGGAGAAGGAAATTAAGAAATCGTTGGTGAAACTCATCGATGGAAGGAAAGAGAATGCATGTGGAGATGAAGATGTGATGAAAGGGCACAAGGATTTGCTGGGGCTTATGATTAAGGCTTCCAATTCCAATATGAATGTTACGGTGGATGATATCGTGGAAGAGTGCAAGACATTTTTCTTTGCAGGCAAACACACCACATCAAACTTGCTGACGTGGACCACGATTCTTTTGGCTATGCACCCACAGTGGCAGGTACGGGCACGTGAGGAGCTACTTTGTGTGTGTGGAACACGTGACATTCCCACCAAGGACGATCTTGCAAAGCTCAAGACGCTTACTATGGTGGCAAACGAGTCCTTGAGACTATACCCTCCCACAATAGCAACAATTAGAAGGGCAAAAGCTGACGTGGAACTAGGTGGGACCTACAAGATCCAATGTGGGACCGAGCTCCTCATTCCCATATTGGCACTCCATCACGATCACGCCACGTGGGGCAGCGATGCAAACGACTTCAATCCTGGTCGTTTTGCCGAGGGAGTATCTCGTGCCTCACTTCACCCATTCGCCTTCATTCCGTTCGGTCTTGGTGCGCGCACTTGCATCGGACAAAACCTTGCTATTCTTCAAACCAAATTGGCCCTCGCAATGATGCTACGTCGTTTTAGTTTCAGGTTGGCCCCAACTTATCAGCACGCACCAACGGTCCTGATGCTGCTTTATCCTCAGTATGGCGCACCTATAATTTTTCAACCTATGTCCACAACCACAATGGATTGTTCTTGA 1521 0.4615 MAAPTPLALVAVLLWWRPRKIERHFSKQGIRGPPYQFFIGNVKEIVGMMLKASSQPMPFSHNILPRVLPFYHHWKKIYGATFLVWFGPTVRVTISDPDLIREIFTSELYEKNEAPPLVRLLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPMIATSVVEMLDKWAAMAEKGEVEIEVSEWFQTLTEDVITRTAFGSSYQDGKAIFQLQAQQMALAADAFQKVFIPGYRFFPTRRNIRSWKLEKEIKKSLVKLIDGRKENACGDEDVMKGHKDLLGLMIKASNSNMNVTVDDIVEECKTFFFAGKHTTSNLLTWTTILLAMHPQWQVRAREELLCVCGTRDIPTKDDLAKLKTLTMVANESLRLYPPTIATIRRAKADVELGGTYKIQCGTELLIPILALHHDHATWGSDANDFNPGRFAEGVSRASLHPFAFIPFGLGARTCIGQNLAILQTKLALAMMLRRFSFRLAPTYQHAPTVLMLLYPQYGAPIIFQPMSTTTMDCS* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00345 506 CDD CYP734 68 492 - -
Rops10g00345 506 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 FunFam Cytochrome P450 734A1 15 499 - -
Rops10g00345 506 Pfam Cytochrome P450 70 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 491 - -
Rops10g00345 506 SUPERFAMILY Cytochrome P450 24 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00345 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Rops10g00345 506 Gene3D Cytochrome P450 15 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00345 Rops-Chr10 9710984 9715627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00345 7 500 Cytochrome P450 AT2G26710 74.354 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00345 K15639 - gmx:100775843 839.336