Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00341 ATGGTCCACAAAGACGTTGACTATGCTCAATACTTCTGCACCTACGCTTTCCTCTATCACCAGAAAGAGATGCTCTCCGATCGAGTTCGCATGGACGCTTACTTCAATGCCATTTTCGACAACAAATCTCACTTCAATGGCAAGACTGTTTTGGATGTGGGAACCGGAAGTGGCATTCTTGCTATATGGTCAGCACAAGCAGGTGCAAGAAAAGTGTATGCGGTTGAAGCTACAAAGATGTCAGAACACGCACGTGCGCTTATCAAAGCGAATAATCTCCAGCATGTGATTGAAGTCATTGAGGGTTCAATGGAGGATGTTACCTTACCAGAGAAAGTTGATGTGATAATCTCTGAGTGGATGGGTTATTTTCTTCTGCGCGAGTCTATGTTTGATTCTGTTATATGTGCTCGTGATCGCTGGCTCAAACCAACAGGAGTGATGTATCCTAGCCATGCTCGCATGTGGATGGCTCCTATCAGGACTGGGATAGGAGATCACAAGATGGGTGATTACGAGTCATCTATGGATGACTGGCACAACTTTGTTGATGAAACAAAAACCTACTATGGTGTTGATATGAGCACTTTAACGAAGCCTTTTTCAGAGGAGCAGAGGAAATACTATCTACAGACATCATTGTGGAACAACCTTCATCCTCATCAAGTCATAGGAACTGCTGCTATAATAAAGGATATTGACTGTCTAACTGCCACTGTGGCTGACATAGAGAAAGTCAGATCAAAGTTTTCTTTGACAATAACCATGGAAATGGCAAAGTTGTGTGGATTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAAGCGAGAACCCGGCTGAACACGAGATTGAGTTAACGACCGCTCCGAGTGAAGATTATGGCACACACTGGGGCCAACAGGTTTTTCTCTTGCATCCCCCTCTGCATGTGAGTGAAGGTGATGATTTAAGTGTTTCTTTCCTGATGAGTCGCTCAAAGGAAAACCATCGTTTGATGGAGGTTGAGCTCGGGTGTGAGATACAACAACATTCCGGCAAGCTTCTTGCACCTTTCAAGAATAAGTACTATGTCGAATGA 1080 0.4417 MVHKDVDYAQYFCTYAFLYHQKEMLSDRVRMDAYFNAIFDNKSHFNGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALIKANNLQHVIEVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGIGDHKMGDYESSMDDWHNFVDETKTYYGVDMSTLTKPFSEEQRKYYLQTSLWNNLHPHQVIGTAAIIKDIDCLTATVADIEKVRSKFSLTITMEMAKLCGFGGWFDVHFRGRSENPAEHEIELTTAPSEDYGTHWGQQVFLLHPPLHVSEGDDLSVSFLMSRSKENHRLMEVELGCEIQQHSGKLLAPFKNKYYVE* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00341 359 CDD AdoMet_MTases 49 149 - -
Rops10g00341 359 Gene3D Vaccinia Virus protein VP39 5 150 IPR029063 -
Rops10g00341 359 Pfam Ribosomal protein L11 methyltransferase (PrmA) 46 119 - -
Rops10g00341 359 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 8 343 IPR025799 GO:0016274|GO:0018216
Rops10g00341 359 FunFam Protein arginine N-methyltransferase PRMT10 152 359 - -
Rops10g00341 359 FunFam Protein arginine N-methyltransferase PRMT10 5 150 - -
Rops10g00341 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 343 IPR029063 -
Rops10g00341 359 Gene3D - 152 359 - -
Rops10g00341 359 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 5 336 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00341 Rops-Chr10 9656164 9661491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00341 10 318 C2H2 Transcription Factor Family AT3G12270 32.727 1.34e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00341 K11434 - gmx:100795134 677.552