Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00334 ATGGCTGCTCTATTGAAGAGGCTTGCAAGAACTACTCCGATCGCATTGGCAAATGCCTTCGTTGCCCAATCCAAATCCTCTCAAAATCACAGATTCAGTAATTTCCGGTTACCATTCACCGCAATGGCCGCCATTTCCGGTGGAGTCTCCTATTTGTACTACGTTTCCTCACCCAACCTCGTTCATTTAGAGCAAGTGAAAGAAGATGGAAGTAGAGATATTGCACTTAATCCGGATAAATGGATCGAATTTAAGTTGCAAGACACTGCCAGGGTCAGTCACAATACCCAGTTATTCAGGTTTTCATTTGATCCCACTAAGAAGTTGGGTTTGGATGTTGCATCTTGCATTATTACGAGGGCACCATTGGGACAAGATGCTGAAGGAAAACCGAAATACGTGATACGTCCGTATACTCCTATATCAGATCCTGAATCTAAGGGATACTTTGATTTGTTAATCAAGGTGTATCCCGAAGGAAAAATGAGCCAGCATTTTGCAAGCTTAAAGCCAGGTGATATTCTTGAAGTGAAAGGGCCCATTGAAAAGCTCAGATATACTCCTAATATGAAGAAACACATTGGCATGATTGCTGGAGGCACAGGAATTACTCCAATGCTTCAGGTAATTGAAGCTATATTGAAGAATCCCGATGACCAAACTCAGATATCACTACTTTATGCTAATGTCTCCCCAGATGACATACTGCTTAAACAGAAGCTTGACATTCTAGCAGCTAGCCATCCCAACTTAAAGATATTTTACACTGTAGATAATCCAACAAAAAATTGGCATGGAGGTGCAGGTTACATATCAAAGGATATGGTTGTGAAAGGCTTACCCAGTCCCAGTGACGATACTCTTGTGCTTGTTTGTGGTCCACCTTTGATGATGGAACATATATCTGGGGACAAGGCTAAAGACTGGTCACAAGGAGAGCTTACTGGCATACTCAAAGAGCTTGGATACACTGAGCAAATGGTTTACAAGTTTTAG 996 0.4187 MAALLKRLARTTPIALANAFVAQSKSSQNHRFSNFRLPFTAMAAISGGVSYLYYVSSPNLVHLEQVKEDGSRDIALNPDKWIEFKLQDTARVSHNTQLFRFSFDPTKKLGLDVASCIITRAPLGQDAEGKPKYVIRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDILEVKGPIEKLRYTPNMKKHIGMIAGGTGITPMLQVIEAILKNPDDQTQISLLYANVSPDDILLKQKLDILAASHPNLKIFYTVDNPTKNWHGGAGYISKDMVVKGLPSPSDDTLVLVCGPPLMMEHISGDKAKDWSQGELTGILKELGYTEQMVYKF* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00334 331 PRINTS Cytochrome B5 reductase signature 288 296 - -
Rops10g00334 331 PRINTS Cytochrome B5 reductase signature 172 186 - -
Rops10g00334 331 PRINTS Cytochrome B5 reductase signature 136 143 - -
Rops10g00334 331 PRINTS Cytochrome B5 reductase signature 233 244 - -
Rops10g00334 331 PRINTS Cytochrome B5 reductase signature 195 214 - -
Rops10g00334 331 SUPERFAMILY Riboflavin synthase domain-like 73 189 IPR017938 -
Rops10g00334 331 Pfam Oxidoreductase FAD-binding domain 84 186 IPR008333 -
Rops10g00334 331 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 79 187 IPR017927 GO:0016491
Rops10g00334 331 PANTHER NADH-CYTOCHROME B5 REDUCTASE 58 331 IPR001834 GO:0016491
Rops10g00334 331 Gene3D - 179 331 IPR039261 -
Rops10g00334 331 FunFam NADH-cytochrome b5 reductase 74 177 - -
Rops10g00334 331 CDD cyt_b5_reduct_like 84 331 - -
Rops10g00334 331 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 173 329 IPR039261 -
Rops10g00334 331 Gene3D Translation factors 74 178 - -
Rops10g00334 331 FunFam NADH-cytochrome b5 reductase 178 331 - -
Rops10g00334 331 Pfam Oxidoreductase NAD-binding domain 196 302 IPR001433 GO:0016491
Rops10g00334 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 195 214 IPR001709 GO:0016491
Rops10g00334 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 233 244 IPR001709 GO:0016491
Rops10g00334 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 136 143 IPR001709 GO:0016491
Rops10g00334 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 288 296 IPR001709 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00334 Rops-Chr10 9493156 9502586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00334 72 331 NADPH P450 reductases AT5G17770 41.221 1.21e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00334 K00326 - cave:132165401 556.984