Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00299 ATGGGAGATCATCAACGAAGCTTCTCTGCTAATCCCGCCGACTACAAGCTTCTAGAAGAAGTGGGTTATGGCGCCACCGCCACCGTTTACAGAGCGATCTATCTTCCTTTCAACCAACTTGTCGCTGTCAAGAGCTTCGATCTCGATCGTTGCAACACTATTAATCTGGATGACATACGTAGGGAGACTCAAACGATGAGCTTGATCGATCATCCGAATGTGGTGAGGGCTTACTGTTCCTTTACAGTGGAACGGAGCCTTTGGGTGGTGCTGCCATTCATGGATGAGGGTTCCTGCTTGCATCTCATGAAGATAGCTTATTCCGAGGGATTTGAAGAGGATACAATTGGATCTATCCTGAAAGAAACTCTCAAGGCCTTGGACTACCTTCACCAGCAAGGCCATATTCATCGAGATGTCAAGGCAGGCAACATTTTACTCGATAGCAGCGGCGCAGTAAAGCTTGCTGACTTTGGCGTTTCGGCTTGCATGTTTGACACTGGCGAAAGGCGGCGTTCAAGGAACACTTTTGTGGGAACTCCTTGCTGGATGGCACCAGAGGTACTGCAACCGGGAACTGGTTATAATTCCAAGGCTGATATTTGGTCATTTGGGATCACGGCACTGGAGCTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTTTTTCTAATGACAATAAAGAATGCCCCTCCTGGGCTTGATTATGATCGTGATAAAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTGAAAGATCAAACAAAGCGGCCATCGGCAGAGAAGTTACTGAAACATCCCTTCTTCAAACATGCTAAGCCTGCTGAGCTTTCTGTAAAGAAATTGTTTGCTGACTTACCTCCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTTAAAGATGCAGCTCAACTAGCACTGAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCACAGAGTGAATACCAGCGAGGAGTTAGCGCATGGAACTTTGATATCAATGATTTGAAGGCTCAAGCTTCATTGTTGAGGGATGATGATGATGTTAAAGAGATGAGGGAAGAAGATGAAAACAGTATTTTCACCAAATATGAGGCTGGTACAACTGATTCCCAGTCTGGTGCTTGCAAGATGAATTCAGAGACATTACCACAGGGTAAGATCACATCACATATAGGTGGTATAGACATACAACAGACTGAGCAGAGTGAATCCTTGAACAACAAGGAGAAGATTCTTGAAAGTGATCCACAGGAACCTGGATTGCGCAAAAATATTATTTGGAAGAGAAATGGATCAATTACAGAGGCAACAACATCTACTGTAGACAAGGATATAGGTACGAGCAAGATTAAAGCTCAATCTGCAAAAAATCGTCAAACCCAAAGTGGACCACTGGTGCCAGGCATAGTTCTCGGTCATTCCTCCTTAGAAAGAGAACATTCATTTGACAAGCTTGAGCATGGAAATCAATTACCAAGCGAGAAAAATAATCTTCGTCAGATGCGACGAGCTCCAAGTTTTAGTGGTCCATTGATGCTTCCAACTCGAGCTTCAGCAAATAGTTTATCTGCTCCGATAAAGTCTTCTGGAGGATTCAGAGATTCCTTGGATGACAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGGCGATTCTCTGTGACGTCAGAAAATTTAGATCTTGTGAAGGATATTCCTATAAGTTCAGTTTCACGCCGATCTTCACAGGGCTCACCACTGCGTAAATCGGGCAGTGTTGCTGATTGGACGTTGGATTCCAAACAAATGCCAAATGGTCAGGCTCCTAAAGATTCTGCCACTACCAATTTCTCTGCTTCACTTCTTATGCCTCACCTTCAAAATCTTTTTCAGAAAACATCTATTCAACAGGATCTTATAATGAACCTGTTAAATAGCTTGCAACCTGCTGAAGCAATTGATATTTCTCAGAATGGAAAGTTGCCACCTTTACCTCACGGCTCAGAGATCAATGGAAGTGTTGATCCAGCAGCTTCAGAGAGGGAACGTCTTCTGCTGGTCAAAATTGCAGAGCTTCAAGCTAGGATGATCAATTTGACTGATGAACTGACTGCTGAGAAGTTAAAATACATGCAGTTGCAACAACAGCTAACAGCTCTCTACAGTCTGGAACAAAATGGGAATAGGAAAGAGGAAGTTGCATGA 2208 0.4348 MGDHQRSFSANPADYKLLEEVGYGATATVYRAIYLPFNQLVAVKSFDLDRCNTINLDDIRRETQTMSLIDHPNVVRAYCSFTVERSLWVVLPFMDEGSCLHLMKIAYSEGFEEDTIGSILKETLKALDYLHQQGHIHRDVKAGNILLDSSGAVKLADFGVSACMFDTGERRRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVFLMTIKNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHPFFKHAKPAELSVKKLFADLPPLWNRVKALQLKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDINDLKAQASLLRDDDDVKEMREEDENSIFTKYEAGTTDSQSGACKMNSETLPQGKITSHIGGIDIQQTEQSESLNNKEKILESDPQEPGLRKNIIWKRNGSITEATTSTVDKDIGTSKIKAQSAKNRQTQSGPLVPGIVLGHSSLEREHSFDKLEHGNQLPSEKNNLRQMRRAPSFSGPLMLPTRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPISSVSRRSSQGSPLRKSGSVADWTLDSKQMPNGQAPKDSATTNFSASLLMPHLQNLFQKTSIQQDLIMNLLNSLQPAEAIDISQNGKLPPLPHGSEINGSVDPAASERERLLLVKIAELQARMINLTDELTAEKLKYMQLQQQLTALYSLEQNGNRKEEVA* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00299 735 Gene3D Phosphorylase Kinase; domain 1 2 93 - -
Rops10g00299 735 FunFam Serine/threonine-protein kinase BLUS1 4 93 - -
Rops10g00299 735 SMART serkin_6 15 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00299 735 MobiDBLite consensus disorder prediction 578 614 - -
Rops10g00299 735 Coils Coil 690 717 - -
Rops10g00299 735 Pfam Protein kinase domain 15 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00299 735 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Rops10g00299 735 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 97 327 - -
Rops10g00299 735 Gene3D Transferase(Phosphotransferase) domain 1 97 328 - -
Rops10g00299 735 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 708 IPR047173 GO:0043539
Rops10g00299 735 ProSiteProfiles Protein kinase domain profile. 15 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00299 735 SUPERFAMILY Protein kinase-like (PK-like) 14 332 IPR011009 -
Rops10g00299 735 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00299 Rops-Chr10 8583141 8592048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00299 4 726 MAP Kinase Kinase Kinase Kinase AT4G24100 63.862 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Rops10g00299 Pkinase 4.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00299 - - gmx:100809903 1127.08