Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00298 ATGATGATCTACCAACTGAACAGATTTAACTGGTGCGTGGTGTCTCTCCTGCTTACCGTGGTCCAAATCCAAACCAAGGCTCTCTGCTACCAGTACAAAGTTGGAGATCTAGATTCCTGGGGGATTCCCACTTCAGCAAATTCACAACTCTACGAAAAATGGTCCAAATATCACAAACTCAATATTGGTGATTCACTTTTGTTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTTACAGAAGAATCCTACAAGAGCTGCAACCTTAAAGATCCGATCTTGTATATGAACAACGGTAACTCGTTGTTTAACATTACATCAGAGGGGGAATTCTACTTCACCAGTGGAGAGGCTGGCCATTGCCAAAAGAATCAAAAGCTTCATATATCTGTGGGTGAAGGGACGGGACATATGAATGCATATGCTCCAACTTCATTGCCTGACTATGCACCCTCCTATCCCACTGTATTTGGCACCATTCCAGTTTCTCCTTCTTCCTCACCTTACCTTTCTCCAACTTTTTCATTCGTCATCATTGGATTCTTGATATCTACACTGCTCTTTACCGTAATGTGA 579 0.4214 MMIYQLNRFNWCVVSLLLTVVQIQTKALCYQYKVGDLDSWGIPTSANSQLYEKWSKYHKLNIGDSLLFLYPPSQDSVIQVTEESYKSCNLKDPILYMNNGNSLFNITSEGEFYFTSGEAGHCQKNQKLHISVGEGTGHMNAYAPTSLPDYAPSYPTVFGTIPVSPSSSPYLSPTFSFVIIGFLISTLLFTVM* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00298 192 PANTHER BLUE COPPER PROTEIN 28 144 IPR039391 GO:0009055
Rops10g00298 192 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Rops10g00298 192 CDD OsENODL1_like 30 132 IPR041846 -
Rops10g00298 192 FunFam Early nodulin-like protein 1 29 137 - -
Rops10g00298 192 Gene3D - 30 144 IPR008972 -
Rops10g00298 192 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Rops10g00298 192 Pfam Plastocyanin-like domain 48 125 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00298 Rops-Chr10 8579306 8583248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00298 13 163 Phytocyanin Superfamily AT1G64640 55.629 2.96e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00298 - - gmx:100792701 281.182