Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00294 ATGATGATGCTATTAATATTTCCCTTCTCTTCTTCCACGCCGGCAAGTTGTTCTTGGCTACATTTTGTTTTCTTCTTCTCCTGTGATGCTCCGAGGACCCTCATGTCTTATGTGGTTGATTTGCCTCAGCCAGTCACTATGAATTCAGTAGTCTTCGTTTTCAAACGCTGCTTGCGCGGTTGTGATGGATCAGTTTTATTGAACAACACTGCTACGATTGAGAGTGAGCAAGATGCTGCGCCAAATAACAACTCAATAAGGGGTTTGGTTGTTGTGAACGATATCAAGATAGCGGTGGAAAATGCTTGTCCAGCCACAGTTTCTTGTGCTGATATTCTTGCTATTGCATCCGAAGTAGCTTCTGTTCTGGGAGGAGGTCCCTTATGGTCAATTCAATTAGGAAGAAGGGATAGCTTAACGGCAAATCGAACCCTTGCAAATCAAAATCTTCCAACACCCTTCTTCACACTAGATGAACTTAAAGATGCCTTTGCTGTCCAAGGTCTCAACACTACTGATTTAGTTACACTCTCGGAAACATTGCGTGAGATATGCCCCCAGAATGGAACTGGGAGTAACCTCACCGATTTGGACCTGACAACACCTGATCAAGTTGATAACAACTATTATTCCAATCTTCAGAGCCTCAATAGCTTATTTCAGAGTGATCAAGAGCTATTCTCAACCCCAGGTGCAGATACCATTGACATTGTCAATAGCTTCAGTAGTGACCAAGATCTCTTCTTTGACCAATTTATAGCCTCAATCATAAAAATGGGTAATATTGGAGTGCTAACTGGGGATGAAGGAGAAATCCGATTGCAATGTAATTTTGTGAATGGGGACTCTACTGGATTCACTGGTATTGCATCAAAAGATTCCAAAGACGTTCTAGTTAGCTCTATCTAA 909 0.4191 MMMLLIFPFSSSTPASCSWLHFVFFFSCDAPRTLMSYVVDLPQPVTMNSVVFVFKRCLRGCDGSVLLNNTATIESEQDAAPNNNSIRGLVVVNDIKIAVENACPATVSCADILAIASEVASVLGGGPLWSIQLGRRDSLTANRTLANQNLPTPFFTLDELKDAFAVQGLNTTDLVTLSETLREICPQNGTGSNLTDLDLTTPDQVDNNYYSNLQSLNSLFQSDQELFSTPGADTIDIVNSFSSDQDLFFDQFIASIIKMGNIGVLTGDEGEIRLQCNFVNGDSTGFTGIASKDSKDVLVSSI* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00294 302 PRINTS Plant peroxidase signature 47 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 PRINTS Plant peroxidase signature 125 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 PRINTS Plant peroxidase signature 87 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 PRINTS Plant peroxidase signature 106 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 PRINTS Plant peroxidase signature 233 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 CDD secretory_peroxidase 52 279 IPR033905 GO:0004601|GO:0042744
Rops10g00294 302 SUPERFAMILY Heme-dependent peroxidases 59 280 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 Pfam Peroxidase 53 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 PANTHER PEROXIDASE 72-RELATED 180 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 ProSiteProfiles Plant heme peroxidase family profile. 58 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 Gene3D - 260 280 - -
Rops10g00294 302 Gene3D - 53 150 - -
Rops10g00294 302 Gene3D Peroxidase, domain 2 180 259 - -
Rops10g00294 302 Gene3D Peroxidase, domain 2 151 178 - -
Rops10g00294 302 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 PRINTS Haem peroxidase superfamily signature 125 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g00294 302 PRINTS Haem peroxidase superfamily signature 107 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00294 Rops-Chr10 8414705 8418999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00294 54 284 Peroxidase AT5G06730 49.438 2.63e-83 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00294 K00430 - gmx:548068 339.347