Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00288 ATGGCTATGGTACCTTCAACAGTGATTTCCCTTCTATGTCTCCTTCTTGTACTCATTTCTCATACCACAGCCCAGAAAAGCTTCCTGTACCATTTCTGCATGAATGATAAAGGCAACTACACCGCAAATAGTACCTACAAGGCCAACCTCAATACTCTTTTATCCAGCTTGTCTTCCAATACTCAAATTGATTATGGCTTTTACAATTTCTCTAAAGGCCAAAACTCTGACACAGTTAATGCAATTGGGATGTGTAGAGGTGATGTAAAGCCTGATGCTTGCCGCAGCTGCCTCAACAATTCCAGAGTCCTTCTCACACAACTGTGTCCTAATCAGAAGGAGGCAATTGGGTGGTATGACAATTGCATGCTGCGCTACTCAAACCGCTCAATATTTAAAACCATGGAAACTTCCCCTGGTTTTTATATGTGGAACAATGGCAATGCAACAGAAGTTGATAAATTCAATGAGGCGGTGGAGAACTTGCTAGATAGCCTCATAAGCAATGCTTCATCAGGGAACTCCATGCGTAAGTTTGCTGCAGCAAATGTATCAGGGCCGGCCTTTAAAACTATATATGGTCTTGTGCAGTGTACACCAGATTTGTCAGAGCAAGATTGCAGTAAATGCTTGATTGGGGCTAAAACCGAAATCCCAAAATGTTGTGATAAAAAACGAGGTGGTAGAGTTGTAAGACCAAGCTGCAACATCAGATACGCGATATACTCTTTCTTTAATACTGTCAATGTTGCAACACCACCACCACCAACAGTGTCTGCTCTTGGTCCCTCATCTACAGGTGCTTCGTCCACAGAAGGGAAGAGCAACACGTCACGAACTGTAATAATAATAGTTGTGCCTATTATTGCTTTTGTCATATTAGTCATCCTCATCTGCATCTGTTTAAGAAAGAGGAAGCCATGGAAACATGATGAAGTTGAAGCTGAAAATGGTGATGAAATTAGGCCAACTGAGACATTGCAATTGGACTTTGCCACCATCATGGCTGCTACTGAGAACTTTTCTGATGCAAGGAAGCTAGGACAAGGAGGATTTGGATCTGTTTACAAGGGTAGGCTCTCCGATGGTCAGGAAGTTGCAGTCAAGAGGTTGTCTATGAATTCCATCCAAGGAGACACAGAGTTTAAGAATGAAGTGCTTTTAGTGGCCAAGCTTCAGCACCGAAATTTAGTGAGACTACTAGGTTTCTGTTTCGAAAGAAGAGAAAGGCTACTGGTCTATGAGTTTGTTCCCAATAAAAGCCTTGATTTCTTCATATTTGATCAAATCAAACGTTCACAATTGGATTGGGAAAGACGATACAAAATCATAGGAGGCATTGCTAGAGGCCTTCTTTACCTTCATGAGGATTCTCGTTTGAGGATTATTCATCGTGACCTAAAAGCTAGCAACATTCTTTTGGATGCAGAGATGAACCCCAAGATATCAGATTTTGGCATGGCAAGACTAGTTGGAATAGACCAAACTCAAGGAAATACAAGTAGAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCTTTCCATGGACAATTCTCAGTGAAGTCTGATGTATTTAGTTTTGGAGTCCTTGTTTTGGAGATTATAAGTGGCCAGAAAAACAATGTTGTCCGCCAAGGGGAGGATGTAGTGGATCTCGTAACCTTTGCATGGCAAAAGTGGAGGGAAGGGACAGCCTCAAGCATTGTTGATCCCACAATAACCAATGGCTCAAGAAATGAGATAATGAGATGCATTCACATCGCACTACTTTGTGTTCAGGAAATTGTAGTTGACAGACCAACTATGGCTTCAGTTGTACTTATGCTGAATAGTTACTCTGTTAGTCTTCCATTGCCCTCATATCCTGCTCAGTTTACCCATGGTAGAACAAGATTATCATACATTCATTCAGGATCAGAAGAGGATAATCCAGAGGCTTCAATAAATGAGACTTCCATTACTGAGCCATTTCCTCGCTAG 1986 0.4159 MAMVPSTVISLLCLLLVLISHTTAQKSFLYHFCMNDKGNYTANSTYKANLNTLLSSLSSNTQIDYGFYNFSKGQNSDTVNAIGMCRGDVKPDACRSCLNNSRVLLTQLCPNQKEAIGWYDNCMLRYSNRSIFKTMETSPGFYMWNNGNATEVDKFNEAVENLLDSLISNASSGNSMRKFAAANVSGPAFKTIYGLVQCTPDLSEQDCSKCLIGAKTEIPKCCDKKRGGRVVRPSCNIRYAIYSFFNTVNVATPPPPTVSALGPSSTGASSTEGKSNTSRTVIIIVVPIIAFVILVILICICLRKRKPWKHDEVEAENGDEIRPTETLQLDFATIMAATENFSDARKLGQGGFGSVYKGRLSDGQEVAVKRLSMNSIQGDTEFKNEVLLVAKLQHRNLVRLLGFCFERRERLLVYEFVPNKSLDFFIFDQIKRSQLDWERRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMARLVGIDQTQGNTSRIVGTYGYMAPEYAFHGQFSVKSDVFSFGVLVLEIISGQKNNVVRQGEDVVDLVTFAWQKWREGTASSIVDPTITNGSRNEIMRCIHIALLCVQEIVVDRPTMASVVLMLNSYSVSLPLPSYPAQFTHGRTRLSYIHSGSEEDNPEASINETSITEPFPR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00288 661 FunFam cysteine-rich receptor-like protein kinase 10 417 618 - -
Rops10g00288 661 ProSiteProfiles Protein kinase domain profile. 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00288 661 Pfam Salt stress response/antifungal 147 240 IPR002902 -
Rops10g00288 661 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Rops10g00288 661 Gene3D Transferase(Phosphotransferase) domain 1 417 618 - -
Rops10g00288 661 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Rops10g00288 661 MobiDBLite consensus disorder prediction 642 661 - -
Rops10g00288 661 Pfam Protein tyrosine and serine/threonine kinase 345 558 IPR001245 GO:0004672|GO:0006468
Rops10g00288 661 CDD STKc_IRAK 347 612 - -
Rops10g00288 661 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Rops10g00288 661 FunFam Cysteine-rich receptor-like protein kinase 10 297 416 - -
Rops10g00288 661 MobiDBLite consensus disorder prediction 639 661 - -
Rops10g00288 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 657 - -
Rops10g00288 661 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Rops10g00288 661 Gene3D Phosphorylase Kinase; domain 1 304 416 - -
Rops10g00288 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Rops10g00288 661 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
Rops10g00288 661 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Rops10g00288 661 SUPERFAMILY Protein kinase-like (PK-like) 331 635 IPR011009 -
Rops10g00288 661 Gene3D - 24 130 IPR038408 -
Rops10g00288 661 Gene3D - 138 244 IPR038408 -
Rops10g00288 661 SMART serkin_6 341 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00288 Rops-Chr10 8342306 8354154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00288 8 661 Receptor kinase-like Gene Family AT4G21410 51.259 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00288 PK_Tyr_Ser-Thr 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00288 - - lang:109353867 946.421