Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g00287 | ATGAACAAGATTCCATTTAAAGAACTGACTAGTTTCCACTCATTCCCAATTGAAGCTGAAAATGGTGATGAAATTGGGCCAACTGAGACATTGCAATTGGACTTCGCCACCATCATGGTTGCTACTGAGAACTTTTCTGACGCAAGGAAGCTAGGACAAGGAGGATTTGGATCTGTTTACAAGGGTAGGCTCTCCAATGGTCAGGAAGTTGCAATCAAGAGGTTGTCTATGAATTCCAGCCAAGGAGACACAGAGTTTAAGATTGAAGTGCTTTTAGTGGCCAAGCTTCAGCACCGAAATTTAGTGAGACTACTAGGTTTCTTTTTCGAAAGAAGAGAGAGGCTACTGGTCTATGAGTTTGTTCCCAATAAAAGCCTTGATTTCTTCATATTTGAGATGAACCCCAAGATATCAGATTTTGGCATGGCAAGTCTAGTTGGAATAGACCAAACTCAAGGAAATACAAGTAGAATTGTTGGAACCTATAGATATATGGCACCTGAGTATGCTATCCATGGACAATTCTCAGTGAAGTCTGATGTATTTGGTTTTGGAGTACTTGTTTTGGAGATTATAAGTGGCCAGAAAAATAGTGTTGTCCGCCAAGGGGAGGATGTAGTGGATCTCGCATGGCAAAAGTGGAGGGAAGGGACAACCTCAAGCATTTTTGATCCCACAATAATTGATGGTTCAAGAAATGAGATAATGAGATGCATTCACATTGCACTGCTTTGTGTTCAGGAAAGTTTAGCTGACAGACCAACCATGGCTTCAACAGTGGTTATGCTCAACAGTTACTCTGTCACTCTTCCATTGCCCACACAACCTGCTTACTTTACAAGTTTTTCGGTTAAGAAGCATGGATACGACACGGGACACCGATACGACACGATACAAACACAAGGATACGACGAATTTTAA | 921 | 0.4148 | MNKIPFKELTSFHSFPIEAENGDEIGPTETLQLDFATIMVATENFSDARKLGQGGFGSVYKGRLSNGQEVAIKRLSMNSSQGDTEFKIEVLLVAKLQHRNLVRLLGFFFERRERLLVYEFVPNKSLDFFIFEMNPKISDFGMASLVGIDQTQGNTSRIVGTYRYMAPEYAIHGQFSVKSDVFGFGVLVLEIISGQKNSVVRQGEDVVDLAWQKWREGTTSSIFDPTIIDGSRNEIMRCIHIALLCVQESLADRPTMASTVVMLNSYSVTLPLPTQPAYFTSFSVKKHGYDTGHRYDTIQTQGYDEF* | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g00287 | 306 | Gene3D | Transferase(Phosphotransferase) domain 1 | 117 | 270 | - | - | |
Rops10g00287 | 306 | ProSitePatterns | Protein kinases ATP-binding region signature. | 51 | 73 | IPR017441 | GO:0005524 | |
Rops10g00287 | 306 | Pfam | Protein kinase domain | 46 | 129 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g00287 | 306 | ProSiteProfiles | Protein kinase domain profile. | 45 | 267 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g00287 | 306 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 9 | 120 | - | - | |
Rops10g00287 | 306 | Gene3D | Phosphorylase Kinase; domain 1 | 17 | 116 | - | - | |
Rops10g00287 | 306 | Pfam | Protein tyrosine and serine/threonine kinase | 136 | 260 | IPR001245 | GO:0004672|GO:0006468 | |
Rops10g00287 | 306 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 287 | IPR011009 | - | |
Rops10g00287 | 306 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 132 | 280 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g00287 | Rops-Chr10 | 8340582 | 8342161 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g00287 | 19 | 278 | Receptor kinase-like Gene Family | AT4G23230 | 52.396 | 7.66e-104 | 315 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Rops10g00287 | PK_Tyr_Ser-Thr | 2.7e-13 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g00287 | - | - | ccaj:109806154 | 396.741 |