Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00286 ATGAACCCCAAGATATCAGATTTTGGCATGACAAGATTAGTTGGAATAGACCAAACTCAGGGCAACACAAATAGAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCTATCCATGGACAATTCTCTGTGAAGTTTGATGTTTATAGTTTTGGAATACTTGTTTTTGAGATTGTAAGTGGCCAGAAAAATAGTATTATCCGCGAAGGAGAAGATGTACTGGATCTAGGAATCTTTGCATGGAAAAAATGGAGGGAAGGGACAACATCACACATTGTTGATCCCGTAATTACTAATGGTTCAAGAAATGAGATGATGAGATGTATCCACATTGTGCTGCTTTGTGTTAAAAAAAGTGTAGCTGACAGACCAACCATGACTTCAGTCATACTTATGCTCAACAACCACTCTGTTTCTCTTCCATTGCCCTCACTGCCTGCTTATTTCACAAGTTCATCATACATTCATTTCAAATATGATCTAGAGGCAAGTAGATCAATAGAATCAAATATCCAATCTGTTCAAGCTTTAGTAGACGAGGCTTCCATTACTGAGCCATTTCCTCGCTAG 573 0.3839 MNPKISDFGMTRLVGIDQTQGNTNRIVGTYGYMAPEYAIHGQFSVKFDVYSFGILVFEIVSGQKNSIIREGEDVLDLGIFAWKKWREGTTSHIVDPVITNGSRNEMMRCIHIVLLCVKKSVADRPTMTSVILMLNNHSVSLPLPSLPAYFTSSSYIHFKYDLEASRSIESNIQSVQALVDEASITEPFPR* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00286 190 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 184 - -
Rops10g00286 190 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00286 190 Gene3D Transferase(Phosphotransferase) domain 1 1 141 - -
Rops10g00286 190 Pfam Protein tyrosine and serine/threonine kinase 4 131 IPR001245 GO:0004672|GO:0006468
Rops10g00286 190 SUPERFAMILY Protein kinase-like (PK-like) 2 164 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00286 Rops-Chr10 8322888 8323770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00286 1 190 Receptor kinase-like Gene Family AT4G23140 47.716 2.70e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00286 PK_Tyr_Ser-Thr 2.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00286 - - ccaj:109806154 264.618