Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00284 ATGGCTATGGTACCTTCAACAGTGATTTCCCTTCTATGTCTCCTTATTGTACTCATTTCTCATACCACAGCCCAGCCAAGCTTCCTGTACAATTTCTGCATGAATGATAAAGGCAACTACACCGCAAATAGTACCTACAAGGCCAACCTCAATACTCTTTTATCCAGCTTGTCTTCCAATGCTCAAATTGATTATGGCTTTTACAATTTCTCTATAGGCCAAAACTCTGACACAGTTAATGCAATTGGGATGTGTAGAGGTGATGTAAAGCCTGATGGTTGCCGCAGCTGCCTCAACAATTCCAGAGTCCTTCTCACACAACTGTGTCCTAATCAGAAGGAGGCAATTGGGTGGTATGATTCTTGCATGCTGCGCTACTCAAACCGCTCAATATTGAAAACCATGGAAACTTCCCCTAGTTTTTATATGTGGAACAATGACAATGCAACAGAAGTTGATAAATTCAATGAGGTGTTGGAGAACTTGCTAGACAGCCTCATAAGCAATGCCTCATCAGGGAACTCCATGCGTAAGTTTGCTGCAGCAAATGTAACACGGCCAGCCTTTCAAACTATATTTGGTCTTGTGCAGTGTACACCAGATTTGTCAGAGCAAGATTGCAGTGAATGCTTGATTGGGGCTAAAACCGAAATCCCAAAATGTTGTGATAGCAAGAAAGGTGGTAGAGTTGTAAGACCAAGCTGCAACTTCAGATACGAGATATACCCTTTCTTTGATACTGTCAATGTTGCAACACCACAAGCACCGGCATCACCACCACCACCAACAGTATCTGCTCATGGTCCCTCATCTACAGGGAAGAGCAACACATCACGAACTGTAACAATAATAGTTGTGCCTATTATTGCTTTGGTCATATTAGTCATTCTTATCTTCATCTATTTAAGAAAGAGGAGGCCATGGAAACATGATGAAGTTGAAGCTGAAAATGATGATGAAATTAGGCCAACTGAGACATTGCAATTGGACTTCGCCACCATCATGGCTGCTACTGAGAACTTTTCTGATGCAAGGAAGCTAGGACAAGGAGGATTTGGATCTGTTTACAAGGGTAGGCTCTCCAATGGTCAGGAAGTTGCAGTCAAGAGGTTGTCTATGAATTCCAGCCAAGGAGACACAGAGTTTAAGAATGAAGTGCTTTTAGTGGCCAAGCTTCAGCACCGAAATTTAGTGAGACTACTAGGTTTCTGTTTCGAAAGAAGAGAAAGGCTACTGGTCTATGAGTTTGTTCCCAATAAAAGCCTTGATTTCTTCATATTTGATCAAATCAAACGTTCACAATTGGATTGGGAAAGACGATACAAAATAATAGGAGGCATTGCTAGAGGCCTTCTTTACCTTCATGAGGATTCTCGTTTGAGGATTATTCATCGTGACCTTAAAGCTAGCAACATCCTTTTGGATGCAGAGATGAACCCCAAGATATCAGATTTTGGCATGGCAAGACTAGTTGGAATAGACCAAACTCAAGGAAATACAAGTAGAATTGTTGGAACCTATGGATATATGGCTCCTGAGTACGCTATCCATGGACAATTCTCAGTGAAGTCTGATGTATTTAGTTTTGGAGTACTTGTTTTGGAGATTATAAGTGGCCAGAAAAATAGTGCTGTCCGACAAGGGGAGGATGTAGTGGATCTCGTAACCTTTGCATGGCAAAAGTGGAGGGAAGGGACAGCCTCAAGCATTGTTGATCCCACAATAATTGATGGTTCAAGAAATGATATAATGAGATGCATTCACATTGCACTGCTTTGTGTTCAGGAAAGTTTAGCTGACAGACCAACCATGGCTTCAGTGGTGCTTATGCTCAACAGTTACTCTGTCACTCTCCCATTGCCCACACAACCTCCTTACTTCACAAGTTTTTCGGACATTCATCTTGATTCAAAGACAAGTAGATCAACAGAATCAAATACTCAATCTGTTCAAGCTTCAGTAAATGAGGCTTCCATTACTGAGCCATTTCCTCGCTAG 1998 0.4174 MAMVPSTVISLLCLLIVLISHTTAQPSFLYNFCMNDKGNYTANSTYKANLNTLLSSLSSNAQIDYGFYNFSIGQNSDTVNAIGMCRGDVKPDGCRSCLNNSRVLLTQLCPNQKEAIGWYDSCMLRYSNRSILKTMETSPSFYMWNNDNATEVDKFNEVLENLLDSLISNASSGNSMRKFAAANVTRPAFQTIFGLVQCTPDLSEQDCSECLIGAKTEIPKCCDSKKGGRVVRPSCNFRYEIYPFFDTVNVATPQAPASPPPPTVSAHGPSSTGKSNTSRTVTIIVVPIIALVILVILIFIYLRKRRPWKHDEVEAENDDEIRPTETLQLDFATIMAATENFSDARKLGQGGFGSVYKGRLSNGQEVAVKRLSMNSSQGDTEFKNEVLLVAKLQHRNLVRLLGFCFERRERLLVYEFVPNKSLDFFIFDQIKRSQLDWERRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMARLVGIDQTQGNTSRIVGTYGYMAPEYAIHGQFSVKSDVFSFGVLVLEIISGQKNSAVRQGEDVVDLVTFAWQKWREGTASSIVDPTIIDGSRNDIMRCIHIALLCVQESLADRPTMASVVLMLNSYSVTLPLPTQPPYFTSFSDIHLDSKTSRSTESNTQSVQASVNEASITEPFPR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00284 665 MobiDBLite consensus disorder prediction 639 665 - -
Rops10g00284 665 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Rops10g00284 665 SMART serkin_6 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00284 665 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Rops10g00284 665 MobiDBLite consensus disorder prediction 253 276 - -
Rops10g00284 665 Pfam Protein tyrosine and serine/threonine kinase 345 608 IPR001245 GO:0004672|GO:0006468
Rops10g00284 665 MobiDBLite consensus disorder prediction 639 658 - -
Rops10g00284 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 661 - -
Rops10g00284 665 FunFam Cysteine-rich receptor-like protein kinase 10 303 416 - -
Rops10g00284 665 Gene3D Transferase(Phosphotransferase) domain 1 417 618 - -
Rops10g00284 665 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Rops10g00284 665 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Rops10g00284 665 Pfam Salt stress response/antifungal 148 241 IPR002902 -
Rops10g00284 665 FunFam cysteine-rich receptor-like protein kinase 10 417 618 - -
Rops10g00284 665 CDD STKc_IRAK 347 612 - -
Rops10g00284 665 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
Rops10g00284 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Rops10g00284 665 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Rops10g00284 665 ProSiteProfiles Protein kinase domain profile. 341 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00284 665 SUPERFAMILY Protein kinase-like (PK-like) 331 649 IPR011009 -
Rops10g00284 665 Gene3D Phosphorylase Kinase; domain 1 305 416 - -
Rops10g00284 665 Gene3D - 137 244 IPR038408 -
Rops10g00284 665 Gene3D - 25 130 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00284 Rops-Chr10 8312053 8315244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00284 9 665 Receptor kinase-like Gene Family AT4G05200 49.258 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00284 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00284 - - lang:109353867 966.452