Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00283 ATGGCCATGGCACCTTCAGGAGTGGTTTCCCTTCTGTGTCTCCTTGTTATTCTCATATCACACACCACCGCCCAGCCAAGCTTCCTGTACCATTTCTGCATGAATGATAGAGGCAACTACACTGCAAATAGCACCTACAAGACCAATCTCAATACTCTTTTGTCCAGTTTGTCTTCCAACACACAAATTGATTATGGCTTCTACAATTTCTCTGAGGGCCAAAACCCTGATAAAGTTAATGCAATAGGGATGTGTAGAGGTGACGTTAAACCAGATGTGTGCCGCAGTTGCCTCAACGATTCCAGAGTCCTTCTCACACAGCGTTGTCCAAATCAGAAAGAGGCAATTGGGTGGTATGACAATTGCATGCTGCGCTACTCAAACCGCTCAATATTTAACACCATGGAACCTGACCCTACTTACTTTTTGTGGGTCCAAAGTAATGCAACTGATATGGATCAGTTCGATCAAGTGCTAAGGGGCTTGGTGGATAACCTGAGAAGTAAAGCTGCATCAGGTGATTCCCTTAAGAAGTATGCTGCGGGAAGCGTAGCAGGTCCAAGCTTTCAAACAATATTTGCTCTTCTTCAATGCACACCTGATCTATCAGAGCAACAGTGCAATGATTGCTTGGTCCGTGCTATCTCAGATATTTCAAGTTGTTGTGCTGGCAAGTTAGGTGGCAGAATTGGAAAACCAAGCTGCAATCTTAGATTTGATACATCGCCCTTCTATGACTCTACACCTGATGCATCTCCACCACCTACGCCATCGCAAGTGACTCCTCCGGTCACCAACACCACTTCCACACAAGGAAAGAGCAACACAACAAGAACTGTCATTGCGGTAGTTGTGCCAATTGTGGCTATCATTGTACTGGCCATCTCTGTGTGCATCTTCTTAAGAGCAAAGAAGCAAAGGGAAAATATTTACATTGATACTGAAGTTGAAAATGAAATTGAACCTACTGAGACATTGCAATTCGACTTTGACACCATAAGAATGGCTACAAAAAACTTTTCTGAGACAAATATGCTAGGACAAGGAGGATTTGGACCTGTTTACAAGGGTAAGCTTTCCAATGGGCAAGAAGTTGCTGTCAAAAGGTTGTCAATGAATTCAGGACAAGGAGATACAGAATTTAAGAACGAGGTGCAACTAGTGGCCAAACTACAGCACCGAAATTTAGTCAGACTACTTGGTTTCAGTTTGGAAAGAAAAGAAAGGTTACTAGTCTATGAGTTTGTTCCCAATAAAAGCCTTGATTACTTCATATGTGATCCAATTAAGCGAGCACATTTGGATTGGGAAAGGCGGTATAAAATCATAGGAGGCATCGCCAGAGGCCTTCTTTATCTTCATGAGGATTCAAGACTCCGTATTGTTCATCGAGATCTCAAAGCAAGTAACATTCTCTTGGATGCAGAGATGAAGCCTAAGATATCAGATTTTGGCATGGCAAGATTGTTTGCTGTGGATCAAACTCAAGGAAACACAAGTAGAATTGTTGGAACTTATGGATATATGGCCCCAGAGTACGTAAGGCAAGGACGATTCTCTATGAAGTCAGATGTCTTTAGTTTTGGCGTACTGGTTCTAGAAATTATAAGTGGCCAGAAAAACAGTGACTTCCATAATGGAGAGTATCTATTAAGCTTTGCCTGGAAAAACTGGAGGGAGGGAACAACATCAAATGTTGTAGACCCCACGTTAAATAAAGGCTCAATAAATGAAATAATGAGATGCATCCACATTGGTTTACTCTGTGTTCAGGAAAATTTAGCTAATAGACCAACCATGGCTTCTGTGGTACTCATGCTTAATAGCTACTCTCACACTCTCCCCGTACCTTCAGAGCCTGCATTTTTTATGCACAGCAGAGGTTTTTCAGATATTCAGTCATGGGAATATAATTCAGGGGCAACTGAGTAA 1932 0.4213 MAMAPSGVVSLLCLLVILISHTTAQPSFLYHFCMNDRGNYTANSTYKTNLNTLLSSLSSNTQIDYGFYNFSEGQNPDKVNAIGMCRGDVKPDVCRSCLNDSRVLLTQRCPNQKEAIGWYDNCMLRYSNRSIFNTMEPDPTYFLWVQSNATDMDQFDQVLRGLVDNLRSKAASGDSLKKYAAGSVAGPSFQTIFALLQCTPDLSEQQCNDCLVRAISDISSCCAGKLGGRIGKPSCNLRFDTSPFYDSTPDASPPPTPSQVTPPVTNTTSTQGKSNTTRTVIAVVVPIVAIIVLAISVCIFLRAKKQRENIYIDTEVENEIEPTETLQFDFDTIRMATKNFSETNMLGQGGFGPVYKGKLSNGQEVAVKRLSMNSGQGDTEFKNEVQLVAKLQHRNLVRLLGFSLERKERLLVYEFVPNKSLDYFICDPIKRAHLDWERRYKIIGGIARGLLYLHEDSRLRIVHRDLKASNILLDAEMKPKISDFGMARLFAVDQTQGNTSRIVGTYGYMAPEYVRQGRFSMKSDVFSFGVLVLEIISGQKNSDFHNGEYLLSFAWKNWREGTTSNVVDPTLNKGSINEIMRCIHIGLLCVQENLANRPTMASVVLMLNSYSHTLPVPSEPAFFMHSRGFSDIQSWEYNSGATE* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00283 643 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Rops10g00283 643 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Rops10g00283 643 CDD STKc_IRAK 346 608 - -
Rops10g00283 643 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
Rops10g00283 643 Pfam Protein tyrosine and serine/threonine kinase 343 605 IPR001245 GO:0004672|GO:0006468
Rops10g00283 643 Pfam Salt stress response/antifungal 148 241 IPR002902 -
Rops10g00283 643 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Rops10g00283 643 FunFam Cysteine-rich receptor-like protein kinase 10 302 415 - -
Rops10g00283 643 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 625 - -
Rops10g00283 643 Gene3D Phosphorylase Kinase; domain 1 314 415 - -
Rops10g00283 643 FunFam cysteine-rich receptor-like protein kinase 10 416 614 - -
Rops10g00283 643 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Rops10g00283 643 SMART serkin_6 340 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00283 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Rops10g00283 643 Gene3D Transferase(Phosphotransferase) domain 1 416 616 - -
Rops10g00283 643 SUPERFAMILY Protein kinase-like (PK-like) 324 635 IPR011009 -
Rops10g00283 643 MobiDBLite consensus disorder prediction 246 273 - -
Rops10g00283 643 ProSiteProfiles Protein kinase domain profile. 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00283 643 Gene3D - 25 130 IPR038408 -
Rops10g00283 643 Gene3D - 139 244 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00283 Rops-Chr10 8292577 8295746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00283 13 626 Receptor kinase-like Gene Family AT4G21410 52.113 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00283 PK_Tyr_Ser-Thr 7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00283 - - gmx:102662291 1052.74