Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00282 ATGGCCATGGTTTCAAGAATGACTATATTTTTCTGCATCCTTATCATACTCATATCTCCATCCAACGTGGTGTCATCTTTCCTAGGCTCCCTTTGTGACGATGGCAAAGGTAATTACACTGCTAACAGTAACTACCAGAACAACCTCAATACCCTTTTGTCCAACCTCTCTTCAAACACACAGATTGACTATGGCTTCTATAATTTTACTTATGGTCAAGATAATGACAGAGTAAAAGCAATTGGGCTGTGTAGAGGTGATGTTAAGCCAGATGCGTGCCGTAGTTGCCTCAACGATTCCAGAGTCGTTCTCACAAAACAGTGTCCAAATCAGAAGGAGGCAATTGTGTGGTATGACAATTGCATGCTACGCTACTCGAACCGCTCAATATTTAAAACCACGGAAGTTTTCCCTTATTTTTATATGAAGAACCCTTTCAATGCAACAGATGTTGATAAATTCAATGAAATTTTGGAGAATTTGCTAGATAACCTCATAAGCAATGCTTCATCAGGCAACTCCATGCGTAAGTTTGCTGCAGCAAATGTAACAGGGCCAGCCTTTCAAACTATATATGGTCTTGTGCAGTGTACACCGGATTTGTCAGAGCTAGAATGCAGGGCATGCTTGATTGAGGCTAAATCAGAAATCCCACAATGTTGTGATACCAAGAAAGGTGGGAGGGTTGTAAAACCTAGCTGCAACTTCAGATACGAGGTATACCCCTTCTTTGATCTTGCCAATGTTGCAACACCTCAAGCACCGGCAGAACCACCACCAACAGAGTCTGCTCCTCGTCCCTCGTCTACAGATGCCTCGTCCACTGAAGGGAACAGCAACACATCACGAACTGTAATAGTAATAGTCGTGCCAATTATTGCCTTTGTCATATTAGTCATCCTAACCTGCATCTATTTAAGAAAGAGGAAGCCACGGAAACATTATGAAGTTGAAGCTGAAAATGGTGATGAAATTAGGCCAACTGAGACATTGCAATTGGACTTCGCCACCATCATGGCTGCAACCGACAACTTTTCTGATGCAAGGAAGCTAGGACAGGGAGGATTTGGATCTGTTTACAAGGGTAGGCTCTCCGATGGTCAGGAAGTTGCAGTCAAAAGGTTGTCTATGAACTCCATTCAAGGGGATATAGAGTTTAAGAATGAAGTGTTGTTGGTGGCCAAGCTTCAGCACCGAAATTTAGTCAGGCTACTAGGTTTTTGTTTGGAAAGAAGAGAAAGGCTACTGGTCTATGAGTTTGTTCCCAATAAAAGCCTTGATTTCTTCATATTTGATCAAATCAAACGTGCACAATTACATTGGGAAAGGCGATACAAAATCATAGGAGGCATTGCTAGAGGCCTTCTTTATCTTCACGAAGATTCACGTCTGAGGATTATTCATCGTGATCTAAAGGCAAGCAACATTCTTTTGGATGCCGAGATGAACCCCAAGATAGCAGATTTTGGCATGGCAAGATTAGTTGGAATAGACCAAACACAGGTCAATACATTCAGAATTGTTGGAACCTATGGATATATGGCACCCGAGTATGCTATGCATGGGCTATTCTCAGTGAAGTCTGATGTATTTAGTTTTGGAGTACTTGTTCTAGAGATTGTAAGTGGCCAGAAAAATAGTGGTGTCAGTCAAGGGGAGGATGTGGTGGATCTAGTAACCTTTGCATGGCAAAACTGGAGAGAAGGGACAGCCTCAAGTATTATTGATCCGACAATTGCTAATGGTTCAAGAAATGAGATGATGAGATGTATCCACATTGCACTACTTTGTGTTCAGGAAAATGTAGCAGACAGACCAACCATGGCTTCAGTTGTACTTATGCTTAACAGCTACTTTCTCACTCTTCCAGTGCCCTCACAACCTTCTTACTTCACAAGTTTCTCAGACATTCATTCAGGATCACGAGAGTATGATCGAGAGGCAAGTAGATCAACAGAATCAAATATTCAATCTATGCAAGCTTCAGTAAATGATGCTTCCATTACTCAACCATTTCCTCGTTAG 2025 0.4183 MAMVSRMTIFFCILIILISPSNVVSSFLGSLCDDGKGNYTANSNYQNNLNTLLSNLSSNTQIDYGFYNFTYGQDNDRVKAIGLCRGDVKPDACRSCLNDSRVVLTKQCPNQKEAIVWYDNCMLRYSNRSIFKTTEVFPYFYMKNPFNATDVDKFNEILENLLDNLISNASSGNSMRKFAAANVTGPAFQTIYGLVQCTPDLSELECRACLIEAKSEIPQCCDTKKGGRVVKPSCNFRYEVYPFFDLANVATPQAPAEPPPTESAPRPSSTDASSTEGNSNTSRTVIVIVVPIIAFVILVILTCIYLRKRKPRKHYEVEAENGDEIRPTETLQLDFATIMAATDNFSDARKLGQGGFGSVYKGRLSDGQEVAVKRLSMNSIQGDIEFKNEVLLVAKLQHRNLVRLLGFCLERRERLLVYEFVPNKSLDFFIFDQIKRAQLHWERRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMNPKIADFGMARLVGIDQTQVNTFRIVGTYGYMAPEYAMHGLFSVKSDVFSFGVLVLEIVSGQKNSGVSQGEDVVDLVTFAWQNWREGTASSIIDPTIANGSRNEMMRCIHIALLCVQENVADRPTMASVVLMLNSYFLTLPVPSQPSYFTSFSDIHSGSREYDREASRSTESNIQSMQASVNDASITQPFPR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00282 674 Gene3D Phosphorylase Kinase; domain 1 307 420 - -
Rops10g00282 674 FunFam Cysteine-rich receptor-like protein kinase 10 307 420 - -
Rops10g00282 674 FunFam Cysteine-rich receptor-like protein kinase 10 138 243 - -
Rops10g00282 674 Gene3D Transferase(Phosphotransferase) domain 1 421 621 - -
Rops10g00282 674 Pfam Protein tyrosine and serine/threonine kinase 349 613 IPR001245 GO:0004672|GO:0006468
Rops10g00282 674 SUPERFAMILY Protein kinase-like (PK-like) 332 646 IPR011009 -
Rops10g00282 674 Gene3D - 25 129 IPR038408 -
Rops10g00282 674 Gene3D - 137 243 IPR038408 -
Rops10g00282 674 MobiDBLite consensus disorder prediction 642 674 - -
Rops10g00282 674 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Rops10g00282 674 CDD STKc_IRAK 351 616 - -
Rops10g00282 674 MobiDBLite consensus disorder prediction 651 674 - -
Rops10g00282 674 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Rops10g00282 674 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Rops10g00282 674 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 670 - -
Rops10g00282 674 FunFam cysteine-rich receptor-like protein kinase 10 421 622 - -
Rops10g00282 674 SMART serkin_6 345 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00282 674 MobiDBLite consensus disorder prediction 252 279 - -
Rops10g00282 674 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 130 - -
Rops10g00282 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Rops10g00282 674 ProSiteProfiles Protein kinase domain profile. 345 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00282 674 Pfam Salt stress response/antifungal 148 240 IPR002902 -
Rops10g00282 674 Pfam Salt stress response/antifungal 32 127 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00282 Rops-Chr10 8250891 8254301 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00282 36 674 Receptor kinase-like Gene Family AT4G21410 51.220 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00282 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00282 - - gmx:113000773 943.34