Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00280 ATGAACCCCAAGATATCAGATTTTGACATGGCAAGATTAGTTGGAATAGATCAAACTCAAGGCAACACAAGTAGAATTGTTGGGACCTATGGATACATGGCACCTGAGTATGCTATCCATGGACAATTCTCAGTGAAGTCTGATGTATTTAGTTTTGCAGTACTTGTTTTGGAGATTATAATTGGCCAGAAAAATAGTGCTGTCCGCCAAGGGGAGGATGTAGTGGATCTCGTAACCATTGCATGGCAAAAGTGGAGGGAAGGGACGGCCTCAAGCATTGTTGATTCCACAATAATTGATGGTTCAAGAAATGAGATAATGAGATGCATTCACATTGCGCTGCTTTGTGTTCAGGAAAGTGTAGCTGAAAGACCAACCATGGCTTCAGTGGTGCTTATGCTCAACAGTTACTCTGTCACTCTTCCATTGCCCACACAACCTGCTTACTTCACAAGTTTTTCGGACATTCATCTTGATCCAAAGACAAGCAGATCAACAGAATCAAAAACTCAATCTGTTCAAGCTTCAGTAAATGAGGCTTCCATTACTGAGCCATATCCTTGCTAG 567 0.418 MNPKISDFDMARLVGIDQTQGNTSRIVGTYGYMAPEYAIHGQFSVKSDVFSFAVLVLEIIIGQKNSAVRQGEDVVDLVTIAWQKWREGTASSIVDSTIIDGSRNEIMRCIHIALLCVQESVAERPTMASVVLMLNSYSVTLPLPTQPAYFTSFSDIHLDPKTSRSTESKTQSVQASVNEASITEPYPC* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00280 188 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 184 - -
Rops10g00280 188 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 14 139 - -
Rops10g00280 188 MobiDBLite consensus disorder prediction 161 188 - -
Rops10g00280 188 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00280 188 MobiDBLite consensus disorder prediction 161 181 - -
Rops10g00280 188 SUPERFAMILY Protein kinase-like (PK-like) 2 172 IPR011009 -
Rops10g00280 188 Gene3D Transferase(Phosphotransferase) domain 1 1 141 - -
Rops10g00280 188 Pfam Protein tyrosine and serine/threonine kinase 4 132 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00280 Rops-Chr10 8238094 8238938 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00280 1 149 Receptor kinase-like Gene Family AT4G23230 62.000 6.22e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00280 PK_Tyr_Ser-Thr 2.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00280 - - lang:109353867 275.789