Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g00278 | ATGGCTACAAAAAACTTTTCTGAGACAAATATGCTAGGACAAGGAGGATTTGGACCTGTTTACAAGGGTAAGCTTTCCAATGGGCAAGAAGTTGCTGTCAAAAGGTTGTCAATGAATTCAGGACAAGGAGATACAGAATTTAAGAACGAGGTGCAACTAGTGGCCAAACTACAGCACCGAAATTTAGTCAGACTACTTGGTTTCAGTTTGGAAAGAAAAGAAAGGTTACTAGTCTATGAGTTTGTTCCCAATAAAAGCCTTGATTACTTCATATGTGATCCAATTAAGCGAGCACATTTGGATTGGGAAAGGCGGTATAAAATCATAGGAGGCATCGCCAGAGGCCTTCTTTATCTTCATGAGGATTCAAGACTCCGTATTGTTCATCGAGATCTCAAAGCAAGTAACATTCTCTTGGATGCAGAGATGAAGCCTAAGATATCAGATTTTGGCATGGCAAGATTGTTTGCTGTGGATCAAACTCAAGGAAACACAAGTAGAATTGTTGGAACTTATGGATATATGGCACCAGAGTACGTAAGGCAAGGACGATTCTCTATGAAGTCAGATGTCTTTAGTTTTGGCGTACTGGTTCTAGAAATTATAAGTGGCCAGAAAAACAGTGACTTCCATAATGGAGAGTATCTATTAAGCTTTGCCTGGAAAAACTGGAGGGAGGGAACAACATCAAATGTTGTAGACCCCACATTAAATAAAGGCTCAATAAATGAAATAATGAGATGCATCCACATTGGTTTACTTTGTGTTCAGGAAAATTTAGCTAATAGACCAACCATGGCTTCTGTGGTACTAATGCTTAATAGCTACTCTCACACTCTCCCAGTACCTTCAGAGCCTGCATTTTTTATGCACAGCAGAGGTTTTTCAGATATTCAGTCATGGCAGTATAATTCAGGGGCAACTGAGTAA | 930 | 0.3957 | MATKNFSETNMLGQGGFGPVYKGKLSNGQEVAVKRLSMNSGQGDTEFKNEVQLVAKLQHRNLVRLLGFSLERKERLLVYEFVPNKSLDYFICDPIKRAHLDWERRYKIIGGIARGLLYLHEDSRLRIVHRDLKASNILLDAEMKPKISDFGMARLFAVDQTQGNTSRIVGTYGYMAPEYVRQGRFSMKSDVFSFGVLVLEIISGQKNSDFHNGEYLLSFAWKNWREGTTSNVVDPTLNKGSINEIMRCIHIGLLCVQENLANRPTMASVVLMLNSYSHTLPVPSEPAFFMHSRGFSDIQSWQYNSGATE* | 310 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g00278 | 309 | Gene3D | Transferase(Phosphotransferase) domain 1 | 82 | 282 | - | - | |
Rops10g00278 | 309 | FunFam | cysteine-rich receptor-like protein kinase 10 | 82 | 280 | - | - | |
Rops10g00278 | 309 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 1 | 81 | - | - | |
Rops10g00278 | 309 | ProSiteProfiles | Protein kinase domain profile. | 6 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g00278 | 309 | PIRSF | ILK | 1 | 285 | - | - | |
Rops10g00278 | 309 | Pfam | Protein tyrosine and serine/threonine kinase | 9 | 271 | IPR001245 | GO:0004672|GO:0006468 | |
Rops10g00278 | 309 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 127 | 139 | IPR008271 | GO:0004672|GO:0006468 | |
Rops10g00278 | 309 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 2 | 293 | - | - | |
Rops10g00278 | 309 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 81 | - | - | |
Rops10g00278 | 309 | CDD | STKc_IRAK | 12 | 274 | - | - | |
Rops10g00278 | 309 | SMART | serkin_6 | 6 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g00278 | 309 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 301 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g00278 | Rops-Chr10 | 8198127 | 8199483 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g00278 | 2 | 292 | Receptor kinase-like Gene Family | AT4G23230 | 65.763 | 4.64e-140 | 407 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Rops10g00278 | PK_Tyr_Ser-Thr | 8.8e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g00278 | - | - | gmx:102662291 | 557.755 |