Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00278 ATGGCTACAAAAAACTTTTCTGAGACAAATATGCTAGGACAAGGAGGATTTGGACCTGTTTACAAGGGTAAGCTTTCCAATGGGCAAGAAGTTGCTGTCAAAAGGTTGTCAATGAATTCAGGACAAGGAGATACAGAATTTAAGAACGAGGTGCAACTAGTGGCCAAACTACAGCACCGAAATTTAGTCAGACTACTTGGTTTCAGTTTGGAAAGAAAAGAAAGGTTACTAGTCTATGAGTTTGTTCCCAATAAAAGCCTTGATTACTTCATATGTGATCCAATTAAGCGAGCACATTTGGATTGGGAAAGGCGGTATAAAATCATAGGAGGCATCGCCAGAGGCCTTCTTTATCTTCATGAGGATTCAAGACTCCGTATTGTTCATCGAGATCTCAAAGCAAGTAACATTCTCTTGGATGCAGAGATGAAGCCTAAGATATCAGATTTTGGCATGGCAAGATTGTTTGCTGTGGATCAAACTCAAGGAAACACAAGTAGAATTGTTGGAACTTATGGATATATGGCACCAGAGTACGTAAGGCAAGGACGATTCTCTATGAAGTCAGATGTCTTTAGTTTTGGCGTACTGGTTCTAGAAATTATAAGTGGCCAGAAAAACAGTGACTTCCATAATGGAGAGTATCTATTAAGCTTTGCCTGGAAAAACTGGAGGGAGGGAACAACATCAAATGTTGTAGACCCCACATTAAATAAAGGCTCAATAAATGAAATAATGAGATGCATCCACATTGGTTTACTTTGTGTTCAGGAAAATTTAGCTAATAGACCAACCATGGCTTCTGTGGTACTAATGCTTAATAGCTACTCTCACACTCTCCCAGTACCTTCAGAGCCTGCATTTTTTATGCACAGCAGAGGTTTTTCAGATATTCAGTCATGGCAGTATAATTCAGGGGCAACTGAGTAA 930 0.3957 MATKNFSETNMLGQGGFGPVYKGKLSNGQEVAVKRLSMNSGQGDTEFKNEVQLVAKLQHRNLVRLLGFSLERKERLLVYEFVPNKSLDYFICDPIKRAHLDWERRYKIIGGIARGLLYLHEDSRLRIVHRDLKASNILLDAEMKPKISDFGMARLFAVDQTQGNTSRIVGTYGYMAPEYVRQGRFSMKSDVFSFGVLVLEIISGQKNSDFHNGEYLLSFAWKNWREGTTSNVVDPTLNKGSINEIMRCIHIGLLCVQENLANRPTMASVVLMLNSYSHTLPVPSEPAFFMHSRGFSDIQSWQYNSGATE* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00278 309 Gene3D Transferase(Phosphotransferase) domain 1 82 282 - -
Rops10g00278 309 FunFam cysteine-rich receptor-like protein kinase 10 82 280 - -
Rops10g00278 309 FunFam Cysteine-rich receptor-like protein kinase 10 1 81 - -
Rops10g00278 309 ProSiteProfiles Protein kinase domain profile. 6 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00278 309 PIRSF ILK 1 285 - -
Rops10g00278 309 Pfam Protein tyrosine and serine/threonine kinase 9 271 IPR001245 GO:0004672|GO:0006468
Rops10g00278 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Rops10g00278 309 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 293 - -
Rops10g00278 309 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Rops10g00278 309 CDD STKc_IRAK 12 274 - -
Rops10g00278 309 SMART serkin_6 6 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00278 309 SUPERFAMILY Protein kinase-like (PK-like) 2 301 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00278 Rops-Chr10 8198127 8199483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00278 2 292 Receptor kinase-like Gene Family AT4G23230 65.763 4.64e-140 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00278 PK_Tyr_Ser-Thr 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00278 - - gmx:102662291 557.755