Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00277 ATGGTTTCAAGAATGCCAATATTATTTTGTATCCTTATCATACTTACATCTCAATCCAACGCTCAACCAAGTTTCAGATACTCTGGATGTGTCGATGGCAGTGGTAATTACACTGCTAATAGTACCTACCAGAACAACCTCAATATCCTTTTGTCCAACCTCTCTTCTAACACACAGATTGACTATGGCTTCTATAATTTTACCTATGGCCAAGATAATGACAGAGTAAACGCAATTGGGCTGTGTAGAGGTGATGTTAAGCCAGATGCATGTCGCAGTTGCCTCAATGATTCCAGAGTCCTTCTCCCACAACTGTGTCCAAATCAGAAAGAGGCAATTGGAGGGTATGACGAATGCATGTTACGCTACTCGAATCGCTCCATGGAAATTTATCCTACTTTCTGGTTGTGGAACCCTGGCAATGCAACAGATGTTGATAAATTCAATGAAGTTTTGGATAACTTGCTATCTAGCCTCACAAGCAATGCCTTATCAGGGAACTCATTGCGTAAGTTTGCTGCAGCAAGTGCAAAAGGGCCAGCCTTTCAAACTATATATGGTCTTGTGCAGTGTACACCAGATTTGTCAGGGCAAGATTGCAATACATGCTTGATTGGGGCTAAAACAGAAATCCCAAAATGTTGTGATCACAAGCAAGGTGGTAGAGTTGTAAAACCCAGCTGCAACGTCAGATATGAGATAACCCCCTTCTATGATACTGCCAATGTTGCAACACCTCAAGCACCGGCAGAACCACCACCAACAGAATCTGCTCCTCGTCCCTCGTCTACAGATGCCTCGTCCACTGAAGGGAACAGCAACACATCACGAACTGTAATAGTAATAGTCGTGCCAATTATTGCCTTTGTCATATTAGTCATCCTAATCTGCATCTATTTAAGAAAGAGGAAGCCACTGAAACATTATGAAGATGAAGCTGAAAATAGTGATGAAATTAGGCCAATTGAGACATTGCAATTGGACTTCGCCACCATCATGGCAGCAACCGACAACTTTTCTGATGCAAGGAAGCTAGGACAGGGAGGATTTGGATCTGTTTACAAGGGTAGGCTCTCTGATGGTCAGGAAGTTGCAGTCAAAAGGTTGTCTATGAACTCCATTCAAGGGGATATAGAGTTTAAGAATGAAGTGTTGTTGGTGGCCAAGCTTCAGCACCGAAATTTAGTCAGGCTACTAGGTTTTTGTTTGGAAAGAAGAGAAAGACTACTGGTCTATGAGTTTGTTCCCAATAAAAGCCTTGATTTCTTCATATTTGATCAAATCAAACGTGCACAATTACATTGGGAAACGCGATACAAAATCATAGGAGGCATTGCTAGAGGCCTTCTTTATCTTCACGAAGATTCACGTTTGAGGATTATTCATCGTGATCTAAAAGCAAGCAACATTCTTTTGGATGCCGAGATGAACCCCAAGATAGCAGATTTTGGCATGGCAAGATTAGTTGGAATAGACCAAACACAGGTCAATACAATCAGAATTGTTGGAACCTATGGATATATGGCACCCGAGTATGCTATGCATGGGCTATTCTCAGTGAAGTCTGATGTATTTAGTTTCGGAGTACTTGTTCTAGAGATTGTAAGTGGCCAGAAAAATAGTGGTGTCCGTCAAGGGGAGGATGTGGTGGATCTAGTAACCTTTGCATGGCAAAACTGGAGCGAAGGGACAACCTCAAGTATTATTGATCCGACAATTGCTAATGGTTCAAGAAATGAGATGATGAGATGTATCCACATTGCATTGCTTTGTGTTCAAGAAAATGTAGCAGACAGACCAACCATGGCTTCAGTTGTACTTATGCTTAACAGCTACTCTCTCACTCTTCCAGTGCCCTCACAGCCTTCTTATTTCACAAGTTCATCAGACATTCATTTCAACTATGATCCAGAGGCAAGTAGATCAACAGAATCAAAAATTCAATCTATGCAAGCTTCAGTAAATGATGCTTCCATTACTCAGCCATTTCCTCGTTAG 1998 0.4164 MVSRMPILFCILIILTSQSNAQPSFRYSGCVDGSGNYTANSTYQNNLNILLSNLSSNTQIDYGFYNFTYGQDNDRVNAIGLCRGDVKPDACRSCLNDSRVLLPQLCPNQKEAIGGYDECMLRYSNRSMEIYPTFWLWNPGNATDVDKFNEVLDNLLSSLTSNALSGNSLRKFAAASAKGPAFQTIYGLVQCTPDLSGQDCNTCLIGAKTEIPKCCDHKQGGRVVKPSCNVRYEITPFYDTANVATPQAPAEPPPTESAPRPSSTDASSTEGNSNTSRTVIVIVVPIIAFVILVILICIYLRKRKPLKHYEDEAENSDEIRPIETLQLDFATIMAATDNFSDARKLGQGGFGSVYKGRLSDGQEVAVKRLSMNSIQGDIEFKNEVLLVAKLQHRNLVRLLGFCLERRERLLVYEFVPNKSLDFFIFDQIKRAQLHWETRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMNPKIADFGMARLVGIDQTQVNTIRIVGTYGYMAPEYAMHGLFSVKSDVFSFGVLVLEIVSGQKNSGVRQGEDVVDLVTFAWQNWSEGTTSSIIDPTIANGSRNEMMRCIHIALLCVQENVADRPTMASVVLMLNSYSLTLPVPSQPSYFTSSSDIHFNYDPEASRSTESKIQSMQASVNDASITQPFPR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00277 665 ProSiteProfiles Gnk2-homologous domain profile. 130 237 IPR002902 -
Rops10g00277 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Rops10g00277 665 MobiDBLite consensus disorder prediction 243 273 - -
Rops10g00277 665 FunFam cysteine-rich receptor-like protein kinase 10 415 616 - -
Rops10g00277 665 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Rops10g00277 665 FunFam Cysteine-rich receptor-like protein kinase 10 301 414 - -
Rops10g00277 665 MobiDBLite consensus disorder prediction 640 665 - -
Rops10g00277 665 Gene3D Transferase(Phosphotransferase) domain 1 415 616 - -
Rops10g00277 665 ProSiteProfiles Protein kinase domain profile. 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00277 665 Pfam Salt stress response/antifungal 30 125 IPR002902 -
Rops10g00277 665 Pfam Salt stress response/antifungal 141 233 IPR002902 -
Rops10g00277 665 Gene3D Phosphorylase Kinase; domain 1 302 414 - -
Rops10g00277 665 Gene3D - 24 127 IPR038408 -
Rops10g00277 665 Gene3D - 132 237 IPR038408 -
Rops10g00277 665 CDD STKc_IRAK 345 610 - -
Rops10g00277 665 SUPERFAMILY Protein kinase-like (PK-like) 326 640 IPR011009 -
Rops10g00277 665 FunFam Cysteine-rich receptor-like protein kinase 10 132 237 - -
Rops10g00277 665 SMART serkin_6 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00277 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 661 - -
Rops10g00277 665 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Rops10g00277 665 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 128 - -
Rops10g00277 665 Pfam Protein tyrosine and serine/threonine kinase 343 607 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00277 Rops-Chr10 8190870 8194412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00277 30 665 Receptor kinase-like Gene Family AT4G21410 51.142 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00277 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00277 - - lang:109353867 935.636