Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00275 ATGTTGCAAGCTCGTGCAATGCAAGCTGCTCATAAGTCAGCTGGTGGAAAGGTTCCCATGAAGCAGCTCGCCACCAAGGCTGCATTGAGGGAAGCTTACAAGAACAGGAAGTACTTGCCATTTGCTCTCCGTCCCAAGAAGACCAGGGCTATTCGTAGAAGACTCACCAAGCACCAGGCGTCATTGAAGACTGAGCGGGAGAAGAAAAAAGAGATATATTTCCCAATGAGGAAGTTTGCTATCAAGTTTCATGTGGGTGTCTCAGGCTGGTATGTTTCCGTTCAGGTTCAACACCATTGGTGTCATTGA 309 0.479 MLQARAMQAAHKSAGGKVPMKQLATKAALREAYKNRKYLPFALRPKKTRAIRRRLTKHQASLKTEREKKKEIYFPMRKFAIKFHVGVSGWYVSVQVQHHWCH* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00275 102 PANTHER 60S RIBOSOMAL PROTEIN L35 25 82 IPR045059 GO:0000463|GO:0022625
Rops10g00275 102 MobiDBLite consensus disorder prediction 1 21 - -
Rops10g00275 102 PRINTS Histone H3 signature 19 33 IPR000164 GO:0000786|GO:0003677|GO:0030527
Rops10g00275 102 PRINTS Histone H3 signature 5 19 IPR000164 GO:0000786|GO:0003677|GO:0030527
Rops10g00275 102 FunFam 60S ribosomal protein L35 38 83 - -
Rops10g00275 102 Gene3D - 38 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00275 Rops-Chr10 8161944 8162252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00275 26 83 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 84.483 2.18e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00275 K02918 - oeu:111375512 106.301