Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00268 ATGCTCTCTTTTCTTTATCCACTAGTTGTTATTGTGATTTCTCATGCCACAGCCAAGCCAGAATACCAATACACTGTCTGCTTCATAGGTGCAGATTATGCCCCTAACAGCACCTACAGGACCAACCTCAAAGCCCTTCTTTCAAGGCTCACTTCCAACACACAAATTGACTATGGCTTCTACAATTCCTCCTACGGTGACTTAAATGATGAAGTCTACGCAAAAGGACTTTGCAGGGGAGATGTTAACCCAAGTACTTGCCGTAGTTGCCTCAACGGTTCTAGTTTCCTTCTCCTAAAGGAATGTCCACATCAGAAGCATGCATTTGGAGGATATGATAAATGCATATTACACTATGCAGATCACACAATATTTGGTTACGACTCATATGAACATTCATTTGGGGTCTACAATGTGTCAGGTAATACTACAACAACAACGAAACCTTATTTCACTGGATGGAGTCGGAACGATGTCTACATGTCAAGCGATACTAATGTAACAAATTGGGATGAGTACAATTATGTGCTCACCAACTTGCTGTCAAGACTAAAAGTGAAAGCTGCAGCGGGTGATTCCAATCCTAATCGTAAGTTTGCTGCTGGAAAAGCAAAAGTAGCAGGTCAGAGTCATCAAACTATATATGCTGTGGTTCAGTGCTCACCTGATATATTAGAGGCAGAATGCAATGACTGCTTGGCTGGTACTTTCTCAGAAATACCAAAATATTGTTATAACAAGTCAGGTGGTGCCATTATCAAATTCAACTGTAACTTCAGATATCAAAATTCCAGTTTCTATGGGCCTATGGCTGATGAATTGACCCTGCAATTACAATTGTCATCTCCTGCTCTTCCTCCTACACCGTTCACCACTACAAACTCCTCACGCACTACTCATCATGGATGCAGAAACAGATCACACGCTGTCATCGTCAAAGTTGTGCCTGCTGTTGCCTTTGTTGGGTTGCTGATCTTTATTTGCATCTATTTCATAATGAGGAAGAAAAGAAAACATATTGAGAGTGAAGCTAAAGTTGTCAACGAAAATAAACAAGAGCCATCACAATTTGACTTTGACACCATCAGAATCGCTACAAACAACTTCTCTGATGCAAATAAGCTTGGACAGGGTGGATTTGGACCTGTTTACAAGGGCAGGCTCTTTAATGAACAAGAAATTGCAGTCAAAAGAAAAGAACGGCTACTTGCCTATGAGTTTCTTCCCAATAAAAGCCTTGACTACTTCTTATTTGATCCAACAAAGCGTGCACATTTAGATTGGAATACACGCTACAAATTAATTGAAGGCATTGCACGAGGCCTTCTTTACCTTCATGAGGATTCTCAACAGAGGATTATTCATCGTGATCTCAAACCAAGTAACATTCTTCTAGATGCAGAGATGAACCCCAAGATATCAGATTTTGGCTTGGCAAGGCTGTTTGTTCTGGATCAAACTCAGGCTGTCGCAAGTAAAATTGCAGGAACTTTCGGATATATGGCACCTGAGTATGCGAGGCATGGAAAATTCTCAGCCAAGTCAGATGTAGAGATTGTAAGTGGCCAAAAGAATAGCGGATTCCACAATGGAGAGAATGTGGAGCATCTATCAAGCTTTGCTTGGAAAAACTGGATGAAAGGGACAATTTCTAATATTATAGATCCTACCCTAAATGATGGTTCAAGAAATGAAATAGTAAGATGCATTCACATTGGGTTACTATGTGTTCAAGAAAGGGTTGCAGACAGACCAACATTGGCTTCAGTTGTGCTTATGCTTGATAGCCACTCTTTCTCTCTTCCAGTTCCCTTGCAACCTGCCTTTTTTATGAATGATAAATGTTTACCAGACATCCAATCTTCAGAATGCGGTTTCGTCGCAACAGGATCAAATGAACAGAAAAGTAACTCTATTGAAGCATCGGTAAATGAGGCCTCAATTAGCAGTCTACATCCTCGTTAG 1965 0.4066 MLSFLYPLVVIVISHATAKPEYQYTVCFIGADYAPNSTYRTNLKALLSRLTSNTQIDYGFYNSSYGDLNDEVYAKGLCRGDVNPSTCRSCLNGSSFLLLKECPHQKHAFGGYDKCILHYADHTIFGYDSYEHSFGVYNVSGNTTTTTKPYFTGWSRNDVYMSSDTNVTNWDEYNYVLTNLLSRLKVKAAAGDSNPNRKFAAGKAKVAGQSHQTIYAVVQCSPDILEAECNDCLAGTFSEIPKYCYNKSGGAIIKFNCNFRYQNSSFYGPMADELTLQLQLSSPALPPTPFTTTNSSRTTHHGCRNRSHAVIVKVVPAVAFVGLLIFICIYFIMRKKRKHIESEAKVVNENKQEPSQFDFDTIRIATNNFSDANKLGQGGFGPVYKGRLFNEQEIAVKRKERLLAYEFLPNKSLDYFLFDPTKRAHLDWNTRYKLIEGIARGLLYLHEDSQQRIIHRDLKPSNILLDAEMNPKISDFGLARLFVLDQTQAVASKIAGTFGYMAPEYARHGKFSAKSDVEIVSGQKNSGFHNGENVEHLSSFAWKNWMKGTISNIIDPTLNDGSRNEIVRCIHIGLLCVQERVADRPTLASVVLMLDSHSFSLPVPLQPAFFMNDKCLPDIQSSECGFVATGSNEQKSNSIEASVNEASISSLHPR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00268 654 Pfam Salt stress response/antifungal 32 121 IPR002902 -
Rops10g00268 654 Pfam Salt stress response/antifungal 165 263 IPR002902 -
Rops10g00268 654 FunFam cysteine-rich receptor-like protein kinase 10 408 601 - -
Rops10g00268 654 ProSiteProfiles Protein kinase domain profile. 261 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00268 654 FunFam Cysteine-rich receptor-like protein kinase 10 157 266 - -
Rops10g00268 654 ProSiteProfiles Gnk2-homologous domain profile. 155 266 IPR002902 -
Rops10g00268 654 Gene3D Transferase(Phosphotransferase) domain 1 409 600 - -
Rops10g00268 654 SMART serkin_6 369 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00268 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Rops10g00268 654 ProSiteProfiles Gnk2-homologous domain profile. 21 124 IPR002902 -
Rops10g00268 654 Pfam Protein kinase domain 396 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00268 654 Gene3D - 21 123 IPR038408 -
Rops10g00268 654 Gene3D - 157 266 IPR038408 -
Rops10g00268 654 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 20 124 - -
Rops10g00268 654 Gene3D Phosphorylase Kinase; domain 1 330 408 - -
Rops10g00268 654 SUPERFAMILY Protein kinase-like (PK-like) 352 619 IPR011009 -
Rops10g00268 654 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 399 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00268 Rops-Chr10 8034334 8038634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00268 27 654 Receptor kinase-like Gene Family AT4G21410 40.435 1.09e-152 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00268 Pkinase 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00268 - - gmx:100790532 806.979