Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00267 ATGAAAATTGTAGCATTTTATTTTATTAAGTTTGCAGCAGGAAACGGAACAAGTCCAAACGTTGAAACTGTGTTTGGTCACGTGCAGTGCACACCTGATTTGTCAGAGATAGGATGCAAGCAATGCTTGTCTAGGGCAATCTCGCATATCCCAACATGCTGTGCTGGCAGGATACGCGCTAGAATTTTGGCAGCAAGTTGTAACCTTAGATTTGACACCACTCTCTACTATGATCCTACCACGAATGTGCCTCCTCCTCTGTCCATCACTGCCACCTTCATACAAGGTGAATCTGCAGCTGATGACTGTGAAATTGAACCTACTGAGATATTGCAATTCAACTTTCAAACCATCATCGATGCTACAGATAACTTTTCAGATGCAAATAAGCTTGGACAAGGTGGATTTGGACCTGTGTACAAGGGAAGGCTTCCAAATGGCGTAGTTGCTATCAAAAGGTTGTCCAGGGGTTCTGGCCGAGGAGATATAAAATTTAAGAATGAACTGCTATTAGTAGCAAAGCTTCAACACCGAATTTTAGTAAGGCTACTTGGCTTTTGTTTGGAAGCAGGAGAAAGGATATTGGTTTATGAGTTTCTTCCCAATAAAAGTCTTCATTACTTCATATTTGATCCAATCAAGCGTTCACATTTGAATTGGGAAAGGCGCTACAAGATTATAGAAGGTATTGCTCGAGGTCTTCTTTATCTTCATGAAGATTCTCGACTGCGCGTTATTCACCGTGATCTCAAAGCTAGCAACATACTCTTAGATGATGAAATAAATCCTAATATATTAGATTTTGGCATGGCAAGACTATTTGCTGAAGATCAAACTCTAGGAAATACACTTATAGTTGTTGGAACCTATGGATATATGCCACCTGAATATGCATTACATGGACAATTCTCAGCGAAATCAGATGTTTTTAGTTTCGGTGTACTAGTTCTTGAGATAGTTAGTGGACACAGAAACAATGAAATCCATTACGGTGATTATGTGGAACATCTAATAAGCTTTCCATGGAGAAATTGGAGGGAAGGGACTGCCTCAAATATTGTAGATCCAACACTGGACAATAATTCAAGAAGTGAAATAATGAGATGCATCCATATTGCATTACTGTGTGTTCAAGAAAATGTAGCCAACAGACTAACCATGGCAACAGTTGTTGTCATGCTTAACAGCTCCTCTTGCACTCTTCCGGTACCCTCACAACCTGCATATTTTAACAATGCTAGTGGTCCATCAGATACAAGATCAGGTGAATCAAGAAATAGTAACATGCAAGCATCGGCAAATAAGGCTTCCATTACTGAGTTAGATCCTCGCTAG 1335 0.3993 MKIVAFYFIKFAAGNGTSPNVETVFGHVQCTPDLSEIGCKQCLSRAISHIPTCCAGRIRARILAASCNLRFDTTLYYDPTTNVPPPLSITATFIQGESAADDCEIEPTEILQFNFQTIIDATDNFSDANKLGQGGFGPVYKGRLPNGVVAIKRLSRGSGRGDIKFKNELLLVAKLQHRILVRLLGFCLEAGERILVYEFLPNKSLHYFIFDPIKRSHLNWERRYKIIEGIARGLLYLHEDSRLRVIHRDLKASNILLDDEINPNILDFGMARLFAEDQTLGNTLIVVGTYGYMPPEYALHGQFSAKSDVFSFGVLVLEIVSGHRNNEIHYGDYVEHLISFPWRNWREGTASNIVDPTLDNNSRSEIMRCIHIALLCVQENVANRLTMATVVVMLNSSSCTLPVPSQPAYFNNASGPSDTRSGESRNSNMQASANKASITELDPR* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00267 444 Pfam Protein kinase domain 126 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00267 444 ProSiteProfiles Gnk2-homologous domain profile. 1 76 IPR002902 -
Rops10g00267 444 ProSiteProfiles Protein kinase domain profile. 125 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00267 444 MobiDBLite consensus disorder prediction 410 437 - -
Rops10g00267 444 SMART serkin_6 125 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00267 444 FunFam cysteine-rich receptor-like protein kinase 10 200 401 - -
Rops10g00267 444 Gene3D - 6 75 IPR038408 -
Rops10g00267 444 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 100 444 - -
Rops10g00267 444 Pfam Salt stress response/antifungal 16 73 IPR002902 -
Rops10g00267 444 FunFam Cysteine-rich receptor-like protein kinase 10 90 199 - -
Rops10g00267 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Rops10g00267 444 Gene3D Phosphorylase Kinase; domain 1 90 199 - -
Rops10g00267 444 Gene3D Transferase(Phosphotransferase) domain 1 200 401 - -
Rops10g00267 444 MobiDBLite consensus disorder prediction 410 444 - -
Rops10g00267 444 SUPERFAMILY Protein kinase-like (PK-like) 109 424 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00267 Rops-Chr10 8021332 8023887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00267 10 444 Receptor kinase-like Gene Family AT4G21410 48.406 7.00e-147 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00267 Pkinase 7.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00267 - - gmx:100789529 627.476