LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops10g00266	ATGCTCTCTTTTCTTTTTCTTTATCTACTAGTTATTATTGTGATATCTAAAGCCACTGCCAAGCCAGAATACCAATACACTGTCTGCTTCACAGGTGGAGATTATGCCCCTAACAGCACCTACCATACCAACCTCAAAGCCCTTCTTCTTTCAAGGCTCACTTCCAACACACAAATTGACTATGGTTTCTACAATTCCTCCTATGGTGACTTAAATGATGAAGCCTACGCCACTGGACTTTGCAGGGGAGATGTTATCCCAAGTACTTGCCGTAGTTGCCTAAACGATTCTAGTTTCCTTCTCCTAAAGGAATGTCCACATCAGAAGCATGCACTTGGAGGATATGATAAATGCATATTACACTATGCACATCACACAATATTTGGTTATGACTCATATGGACATGGATATATGGATCTAACGAAACCTTATTCCAATGGGTCGAGTCGGATATATGAATCTAACGACGCCTACGTGTCAAGTGATACTAATGTAACAAATTGGGATGAGTACAATTATGTGCTCACCAACTTGCTGTCAAGACTAAGAGCGAAAGCTGCAACGGGTGATTCCAATCCTAATCGTAAGTTTGCTGCAGGAAAAGCAAAAGTAGCAGGTCAGAGTCATCAAACTATATATGCTGTGGTTCAGTGCTCACCTGATATATTAGATGCAGAATGCAATGACTGCTTGGCTGGTGCTTTCTCAGAAATACCAAAATATTGTTATAACAAGTCAGGTGGTGCCATTATCAAATTCAACTGTAACTTCAGATATCAAAATTCCAGTTTCTATGGGCCTATGGCTGATGAATTGACCCTGCAATTACAATTGTCACCTCCTGCTCTTCCTCCTACACCGTTCACCACTACAAACTCCTCACGCACTACTCATCATGGATGCAAAAACAGATCACAAGCTGTCATCGCCAAAGTTGTGCCTGTTGTTGCCTTTGTTGGGTTGCTGATCTTTATTTGCATCTATTTCACAATGAGGAAGAAAAGAAAACATATTGAGAGTGAACCTAAAGCTGTCAGTGAAAATAAACAAGAGTCATCACAATTTGACTTTGACACCATCAGAATAGCCACAAATGACTTCTCGGATGCAAATAAACTTGGACAAGGTGGATTTGGACCTGTTTACAAGGGAAGGCTCTTTAATGAACAAGAAATTGCAGTCAAAAGGTTAGCTGGGAATTCTGGCCAAGGAGATACCGAATTTAAGAGTGAAGTGCTATTAATGGCCAAGCTTAAGCACCGAAATTTAATCAGGCTCCTTGGTTTCTGTTCTAAAAGAGAAGAACGGCTACTTATCTATGAGTTTCTACCCAATAAAAGCCTTGACTACTTCTTATTTGATCCAACAAAGCGTGCACATTTAGATTGGAATACACGCTACAAATTAATTGAAGGCATTGCACGAGGCCTTCTTTACCTTCATGAGGATTCTCAACAGAGGATTATTCATCGTGATCTTAAACCAAGTAACATTCTTCTAGATGCAGAGATGAACCCCAAGATATCAGATTTTGGCTTGGCAAGGCTGTTTGTTGTGGATCAAACTCAGGCTGTCGCAAGTAAAATTGTAGGAACTCTCGGATATATGGCACCTGAGTATGCGAGGCATGGAAAATTCTCAGCCAAGTCAGATGTCTTTAGTTTTGGTGTTATAATTCTAGAGATTGTAAGTGGCCAAAAGAATAGTGGATTCCACAATGGAGAGAATGTGGAGCATCTATCAAGCTTTGCTTGGAAAAACTGGATGAAAGGGACAATTTCTAATATTATAGATCCTACCCTAAATGATGCTTCAAGAAATGAAATAGTAAGATGCATTCACATTGGGTTACTATGTGTTCAAGAAAGGGTTGCAGACAGACCAACATTGGCTTCAGTTGTGCTTATGCTTGATAGCCACTCTTTCTCTCTCCCAAATCCCTTGCAACCTGCCTTTTTTATGAATTATAGATGCTTGCCAGACATCCAATTCTCAGAGTGCAGTTCTGTGGCAACAGGATCAAATGAACAGAAAAGTAACTATGTTGAAGCATCGATAAATGAAGCCTCAATTAGCAGTCTATATCCTCGTTAG	2094	0.4007	MLSFLFLYLLVIIVISKATAKPEYQYTVCFTGGDYAPNSTYHTNLKALLLSRLTSNTQIDYGFYNSSYGDLNDEAYATGLCRGDVIPSTCRSCLNDSSFLLLKECPHQKHALGGYDKCILHYAHHTIFGYDSYGHGYMDLTKPYSNGSSRIYESNDAYVSSDTNVTNWDEYNYVLTNLLSRLRAKAATGDSNPNRKFAAGKAKVAGQSHQTIYAVVQCSPDILDAECNDCLAGAFSEIPKYCYNKSGGAIIKFNCNFRYQNSSFYGPMADELTLQLQLSPPALPPTPFTTTNSSRTTHHGCKNRSQAVIAKVVPVVAFVGLLIFICIYFTMRKKRKHIESEPKAVSENKQESSQFDFDTIRIATNDFSDANKLGQGGFGPVYKGRLFNEQEIAVKRLAGNSGQGDTEFKSEVLLMAKLKHRNLIRLLGFCSKREERLLIYEFLPNKSLDYFLFDPTKRAHLDWNTRYKLIEGIARGLLYLHEDSQQRIIHRDLKPSNILLDAEMNPKISDFGLARLFVVDQTQAVASKIVGTLGYMAPEYARHGKFSAKSDVFSFGVIILEIVSGQKNSGFHNGENVEHLSSFAWKNWMKGTISNIIDPTLNDASRNEIVRCIHIGLLCVQERVADRPTLASVVLMLDSHSFSLPNPLQPAFFMNYRCLPDIQFSECSSVATGSNEQKSNYVEASINEASISSLYPR*	698

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops10g00266	697	SMART	serkin_6	367	610	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops10g00266	697	SUPERFAMILY	Protein kinase-like (PK-like)	351	666	IPR011009	-
	Rops10g00266	697	FunFam	Cysteine-rich receptor-like protein kinase 28	443	645	-	-
	Rops10g00266	697	ProSiteProfiles	Gnk2-homologous domain profile.	153	264	IPR002902	-
	Rops10g00266	697	FunFam	Cysteine-rich RLK (RECEPTOR-like protein kinase) 10	22	127	-	-
	Rops10g00266	697	Gene3D	-	155	264	IPR038408	-
	Rops10g00266	697	Gene3D	-	22	126	IPR038408	-
	Rops10g00266	697	Gene3D	Phosphorylase Kinase; domain 1	327	442	-	-
	Rops10g00266	697	Pfam	Protein tyrosine and serine/threonine kinase	371	634	IPR001245	GO:0004672\|GO:0006468
	Rops10g00266	697	FunFam	Cysteine-rich receptor-like protein kinase 10	330	442	-	-
	Rops10g00266	697	ProSiteProfiles	Protein kinase domain profile.	367	643	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops10g00266	697	CDD	STKc_IRAK	373	638	-	-
	Rops10g00266	697	FunFam	Cysteine-rich receptor-like protein kinase 10	155	264	-	-
	Rops10g00266	697	Gene3D	Transferase(Phosphotransferase) domain 1	443	644	-	-
	Rops10g00266	697	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	32	694	-	-
	Rops10g00266	697	ProSiteProfiles	Gnk2-homologous domain profile.	23	127	IPR002902	-
	Rops10g00266	697	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	488	500	IPR008271	GO:0004672\|GO:0006468
	Rops10g00266	697	Pfam	Salt stress response/antifungal	163	261	IPR002902	-
	Rops10g00266	697	Pfam	Salt stress response/antifungal	33	123	IPR002902	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops10g00266	Rops-Chr10	7996946	8004213	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops10g00266	29	697	Receptor kinase-like Gene Family	AT4G21410	45.773	0.0	562

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Rops10g00266		PK_Tyr_Ser-Thr	1.5e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops10g00266	-		-	gmx:100790058	896.73