Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00265 ATGCTCTCTTTGCTTTATCTACTAGTTGTTATTGTGATATCTAAGGCCACTGCCAAGCCAGAATACCAATACACTGTCTGCTTCACAGGTGGAGATTATGCCCCTAACAGCACCTACCATACCAACCTCAAAGCACTTCTTCTTTCAAGGCTCACTTCCAACACACAAATTGACTATGGTTTCTACAATTCCTCCTATGGTGGCTTAAAGGATGAAGTCTACGCCACTGGACTTTGCAGGGGAGATGTGACCCCAACTACTTGCCGTAGTTGCCTCAACGATTCTAGTTTCCTTCTCCTAAAGGAATGTCCACATCAGAAGGAGGCATTTGGAGGATATGATAAATGCACATTACACTATGCACATCGCACGATATTTGGTTACGACTCATATGAACATGCATTTGGGGTCTACAATGTGTCAGGTAATACTACAACAATCAAACCTTATTCCGCAGGGTGGGTTCGGTTACATGGATCAAACGACGCCTACGTGTCAAGTGATACTAATGTAACAAATTGGGATGAGTACAATTATGTGCTCACCAACTTGCTGTCAAGACTAAGAGTGAAAGCTGCAACGGGTGATTCCAACCCTAATCGTAAGTTTGCTGCAGGAAAAGCAAAAGTAGCAGGTCAGAGTCATCAAACTATATATGCTGTGGTTCAGTGCTCACCTGATATATTAGAGGCAGAATGCAATGACTGCTTGGCTGGTGCTTTCTCAGAAATACCAAAATATTGTTATAACAAGTCAGGTGGTGCAATCATTAGATTCAGTTGTAACTTCAGATATCAAAATTCCAGCTTCTGTGACCCTATGGCTGATGAATTGACCCTGCAATTACAATTGTCACCGCAAGGATCCCCTGCTCTTCCTGCTACAAACTCCTCACACACAACTCATCACGGAAACAAAAACAGGTCACGAGCTGTCATGGTCAAAGTTGTGCCTACTGTTGCCTTTGTTGGGTTGCTGATCTTTATTTGCATCTATTTCATAATGAGGAAGAAAACAAAATATGTTGAGAGTGAACCTAAAGCTGTCAGTGAAAATAAACAAGAGTCATCACAATTTGACTTTGACACCATCAGAATAGCTACAAATGACTTCTCAGATGCAAATAAACTTGGACAAGGTGGATTTGGACCTGTTTACAAGGGCAGGCTCTTTAATGAACAAGAAATTGCAGTCAAAAGGTTAGCTGGGAATTCTGGCCAAGGAGATACCGAATTTAAGAATGAAGTGCTATTAATGGCCAAGCTTAAGCACCGAAATTTAATCAGGCTCCTTGGTTTCTGTTCTAAAAGAGAAGAACGGCTACTTATCTATGAGTTTCTACCCAATAAAAGCCTTGACTACTACTTATTTGATCCAACAAAGCGTGCACATTTATATTGGAATACACGCTACAAATTAATTGAAGGCATTGCACGAGGCCTTCTTTACCTTCATGAGGATTCTCAACAGAGGATTATTCATCGTGATCTCAAACCAAGTAACATTCTTCTTCTAGATGCAGAGATGAACCCCAAGATATCAGATTTTGGCTTGGCAAGGCTGTTTGTTGTGGATCAAACTCAGGCTGTCGCAAGTAAAATTGCAGGAACTCTCGGATATATGGCACCTGAGTATGCGAGGCATGGAAAATTCTCAGCCAAGTCAGATGTCTTTAGCTTTGGAGTTATAATTCTAGAGATTGTAAGTGGCCAAAAGAATAGCGGATTCCACAATGGAGAGAATGTGGAGCATCTATCAAGCTTTGCTTGGAAAAACTGGATGAAAGGGACAATTTCTGATATTATAGATCCTACCCTAAATGATGCTTCAAGAAATGAAATAGTAAGATGCATTCACATTGGGTTACTATGTGTTCAAGAAAGGGTTGCAGACAGACCAACATTGGCTTCAGTTGTGCTTATGCTTGATAGCCACTCTTTCTCTCTCCCAAATCCCTTGCAACCTGCCTTTTTTATGAATTATAGATGTTTGCCAGACATCCAATTTTCGGAGTGCAGTTATGTGGCAACAGGATCAAATGAACAGAAAAGTAACTATGTTGAAGCATCGATAAATGAGGCCTCAATTAGCAGTCTATATCCTCGTTAG 2109 0.4087 MLSLLYLLVVIVISKATAKPEYQYTVCFTGGDYAPNSTYHTNLKALLLSRLTSNTQIDYGFYNSSYGGLKDEVYATGLCRGDVTPTTCRSCLNDSSFLLLKECPHQKEAFGGYDKCTLHYAHRTIFGYDSYEHAFGVYNVSGNTTTIKPYSAGWVRLHGSNDAYVSSDTNVTNWDEYNYVLTNLLSRLRVKAATGDSNPNRKFAAGKAKVAGQSHQTIYAVVQCSPDILEAECNDCLAGAFSEIPKYCYNKSGGAIIRFSCNFRYQNSSFCDPMADELTLQLQLSPQGSPALPATNSSHTTHHGNKNRSRAVMVKVVPTVAFVGLLIFICIYFIMRKKTKYVESEPKAVSENKQESSQFDFDTIRIATNDFSDANKLGQGGFGPVYKGRLFNEQEIAVKRLAGNSGQGDTEFKNEVLLMAKLKHRNLIRLLGFCSKREERLLIYEFLPNKSLDYYLFDPTKRAHLYWNTRYKLIEGIARGLLYLHEDSQQRIIHRDLKPSNILLLDAEMNPKISDFGLARLFVVDQTQAVASKIAGTLGYMAPEYARHGKFSAKSDVFSFGVIILEIVSGQKNSGFHNGENVEHLSSFAWKNWMKGTISDIIDPTLNDASRNEIVRCIHIGLLCVQERVADRPTLASVVLMLDSHSFSLPNPLQPAFFMNYRCLPDIQFSECSYVATGSNEQKSNYVEASINEASISSLYPR* 703
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00265 702 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 20 125 - -
Rops10g00265 702 ProSiteProfiles Protein kinase domain profile. 371 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00265 702 SUPERFAMILY Protein kinase-like (PK-like) 355 671 IPR011009 -
Rops10g00265 702 Pfam Protein tyrosine and serine/threonine kinase 375 639 IPR001245 GO:0004672|GO:0006468
Rops10g00265 702 FunFam Cysteine-rich receptor-like protein kinase 10 335 446 - -
Rops10g00265 702 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 698 - -
Rops10g00265 702 Pfam Salt stress response/antifungal 169 267 IPR002902 -
Rops10g00265 702 Pfam Salt stress response/antifungal 31 121 IPR002902 -
Rops10g00265 702 FunFam Cysteine-rich receptor-like protein kinase 28 447 650 - -
Rops10g00265 702 ProSiteProfiles Gnk2-homologous domain profile. 159 270 IPR002902 -
Rops10g00265 702 Gene3D Transferase(Phosphotransferase) domain 1 447 649 - -
Rops10g00265 702 Gene3D - 161 270 IPR038408 -
Rops10g00265 702 Gene3D - 20 124 IPR038408 -
Rops10g00265 702 SMART serkin_6 371 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00265 702 FunFam Cysteine-rich receptor-like protein kinase 10 161 270 - -
Rops10g00265 702 CDD STKc_IRAK 377 643 - -
Rops10g00265 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Rops10g00265 702 Gene3D Phosphorylase Kinase; domain 1 333 446 - -
Rops10g00265 702 ProSiteProfiles Gnk2-homologous domain profile. 21 125 IPR002902 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops10g00265 Rops-Chr10 7971855 7979521 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00265 27 702 Receptor kinase-like Gene Family AT4G21410 44.863 0.0 533
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops10g00265 PK_Tyr_Ser-Thr 8.1e-45 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00265 - - gmx:100790058 910.983