Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g00255 | ATGATGGGGGTTCCACAAACAGCAACAAGCCCTCCTCCACACTTGTATCCTCAGGAACTTCAGCTCAAGCTTTACCAGGCCTTCATATTTTCAATTCCAATACTCTTTTCAATTATTCTCTTTCTTCTGTTTTACTTGTTCTACCTTAAGAGAAGGGCTTCTTCTCCACACTTACTTCCCATCACTGCCAATCCAACAACTACTTATCGTTACCGTTCCTCTCCTTGTCGTTTGGATCTGGCTGTGCAATTCCTGGACAAACTACCAAGAATTTTGTTTGATGAGGATTTGAGAGCAAGGGATTCACTATGTTGTGTTTGTTTAGGTGAATTTGAGATGAAAGAAGAGGTGCTACAGATTCCTTATTGCAAGCATGTGTTCCACATTGATTGCATACATCATTGGCTACAATCAAACTCCACTTGCCCACTTTGTAGATGTTCCATCATCCCCACTACCAAGTTCCTCAATCCAGCACCTCCTATTAATATTATATCAGACCCACCTCAACAAAGTGCTATCAATTCAAATTCTCCAATACAAATCCAATCATTGCCACCTCAAACTGAAGATGAAGCTGGTGCTTCCTCAAATACTGTGAATTTGTCAAGGGAATGA | 618 | 0.4078 | MMGVPQTATSPPPHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSPHLLPITANPTTTYRYRSSPCRLDLAVQFLDKLPRILFDEDLRARDSLCCVCLGEFEMKEEVLQIPYCKHVFHIDCIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPINIISDPPQQSAINSNSPIQIQSLPPQTEDEAGASSNTVNLSRE* | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g00255 | 205 | PANTHER | RING-H2 FINGER PROTEIN ATL16 | 17 | 178 | IPR044600 | GO:0016567|GO:0016740 | |
Rops10g00255 | 205 | SUPERFAMILY | RING/U-box | 83 | 157 | - | - | |
Rops10g00255 | 205 | CDD | RING-H2_EL5-like | 104 | 146 | - | - | |
Rops10g00255 | 205 | ProSiteProfiles | Zinc finger RING-type profile. | 104 | 146 | IPR001841 | - | |
Rops10g00255 | 205 | FunFam | Putative E3 ubiquitin-protein ligase RHA4A isoform A | 73 | 151 | - | - | |
Rops10g00255 | 205 | Pfam | Ring finger domain | 104 | 146 | IPR001841 | - | |
Rops10g00255 | 205 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 151 | IPR013083 | - | |
Rops10g00255 | 205 | MobiDBLite | consensus disorder prediction | 166 | 205 | - | - | |
Rops10g00255 | 205 | SMART | ring_2 | 104 | 145 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g00255 | Rops-Chr10 | 7767378 | 7769873 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g00255 | 21 | 151 | C3H Transcription Factor Family | AT4G10150 | 41.606 | 8.58e-33 | 116 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g00255 | K19039 | - | gmx:100813129 | 312.768 |