Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00233 ATGGTCCTGATGAACAGTACCGGTTTTACCGGCAAGTCGCAGTTTGTCGCTGCCGGCGAGGAGATTAACAATAACGGCAAAAGGAAGTCTCTGAATTCGAGAGGCAGCAATGACGACGGAATGCTTTCGTTCTCCTCCACCGTGATTCTTCCAGCGTCGAATTTGAAGTCCTCCGCTGGCGCCGGCGATTTGGACCATTCGGATCTGGAAGGTTCAGTGGTAAAGGAGGCTGACAGACCTCATCACAAAGAAACCCTAATATCACCCCAAGGACAACATGACAATTAA 288 0.5 MVLMNSTGFTGKSQFVAAGEEINNNGKRKSLNSRGSNDDGMLSFSSTVILPASNLKSSAGAGDLDHSDLEGSVVKEADRPHHKETLISPQGQHDN* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00233 95 MobiDBLite consensus disorder prediction 56 95 - -
Rops10g00233 95 MobiDBLite consensus disorder prediction 20 42 - -
Rops10g00233 95 MobiDBLite consensus disorder prediction 68 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00233 Rops-Chr10 7120616 7121587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00233 23 77 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.571 1.68e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00233 K13422 - gmx:100776289 97.4413