Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00229 ATGGCGCGGCTTCTCCCGAAGCTAGCGTTAATCGTGTCGGTTCTCGCGTTCCTCTTCTCTCCGTCGCAATCCGCGGTTTTCAGCGTAGATCTAGGCACCGAATCGCTCAAGGTTGCGGTGGTGAACCTGAAACCCGGTCAAAGTCCGATCTCGATCGCGATCAACGAGATGTCGAAGCGAAAATCGCCGGCGCTGGTTTCTTTCCACGACGGCGATCGCCTCCTCGGCGAGGAAGCCGCCGGTCTTGTCGCTCGCTATCCACAAAAAGTGTATTCCCAAATCAGAGACCTAATAGGGAAACCCTACGCTTCCGCGAAGAACTTTCTAGATTCAATGTACTTGCCTTTCGAAGCGATTGAAGATTCTAGAGGAACCGTGAGTTTTAAAGTGGACGAAAACGGCACCGTTTTTACCCCTGAGGAATTGGTCGCGATGGTTCTGAGCTACGCCGTGAGTTTAGCGGAGTTCCATTCGAAGATTCCGATCAAAGACGCGGTGATAACTGTGCCGCCGTATTTCGGACAAGCTGAACGGAAAGGGTTGGTTCAGGCGGCGGAGTTAGCAGGGATTAATGTTCTTTCGTTGATAAACGAACATTCTGGTGCTGCGCTTCAGTATGGGATTGATAAGGACTTCTCAAATGGATCAAGGCATGTGATTTTCTATGACATGGGTTCTAGCAGTACCTATGCTGCACTTGTATATTTCTCTGCTTATAAAGCTAAAGAGTATGGGAAGACGGTGTCTGTGAACCAGTTTCAGGTCAAGGATGTCCGTTGGAACCCAGAGCTGGGTGGTCAGAATATGGAGATGAGATTGGTGGAGTATTTTGCTAATGAGTTCAATGCACAAGTTGGTGATGGAATAGATGTGAGGAGATTTGCCAAGGCTATGGCTAAATTGAAGAAACAGGTTAAACGAACAAAAGAGATTCTTAGTGCAAACACAGCAGCTCCCATTTCAGTTGAATCGCTTCATAATGACCTGGACTTCAGGAGCACAATCACCCGTGAGAAATTTGAAGAGCTCTGTGAAGATATTTGGGAAAAATCTCTTTTACCTGTGAAAGAAGTGCTGGAGCATTCAGACCTGTCAACGGAACAAATATATGCAGTGGAGTTGATTGGAGGTGCTACCAGAGTGCCAAAATTACAGGCTAAGCTTCAAGAGTTCCTTGGGAGAAAAGAACTTGATAGGCATCTTGATGCTGATGAAGCAATAGTTCTTGGTGCAGCTCTGCACGCTGCAAATTTAAGTGATGGAATCAAATTGAACCGCAAACTAGGAATGGTTGATGGTTCCTTATACGGATTTGTGGTTGAGCTGACTGGTCCTGATCTTTTGAAAGATGAAAGCTCAAGGCAGTTACTGGTACCACGAATGAAGAAACTCCCGAGTAAGATGTTCAGATCCATTAATCATAACAAAGATTTTGAAGTTTCACTAGCTTATGAAAGTGAACATCATTTGCCACCTGGTGTTACCTCTCCTTTAATTGCTCAATACCAGATATCTGGTTTGACAGATACGAGTGAGAAATACTCAACTCGGAATCTATCATCCCCCATCAAGGCAAATATACATTTCTCTGTTAGTAGAAGTGGAATTCTTTCTCTGGATCGGGCTGACGCTGTTATTGAAATAACAGAGTGGGTGGAAGTTCCTAGGAAGAATTTGACCATAGAAAATTCAACTATTTTATCAAATGTAACAGATGAATCTGGTGCTAAGAACAGTTCTGAGAAAAGCAACGAAAGTGTGCAAACTGATAGTGGGATTAGTAAGACATCAAACATTAGTGCGGAGGAGCAAGCTGCTGCTGAACCTGCTACAGAGCGAAAGCTGAGAAAGCGGACCTTTAGGGTACCATTAAAGATTGTTGAGAAGATAACAGGACCTGGGATGTCTCTATCGAAAGATATTCTTGCTGAAGCTAAAAGAAAATTAGAAGCACTAGATAAAAAAGATGCAGAAAGAAAAAGAACGGCTGAGTTAAAAAATAATTTAGAAGGATATATATATACTACCAAGGAAAAGATTGAAACTCTTGAGGAGTTTGAAAAAGTTTCTACCAGTGAGGAACGCCAGTCCTTTGTTGAGAAGCTTGATGAGGTGCAAGATTGGTTATATACAGATGGTGAAGATGCCAATGCTACAGAGTTTCAAGAGCGTCTAAATCAGTTAAAAGCTGTTGGAGATCCAATTTTCTTCAGATTAAAAGAGCTAACAGCTCGACCAACGGCAGTTGAGCATGCACGTAAATACATTGATGAGCTGAAACAGATTGTACAAGAGTGGAAAGCAAACAAGTCTTGGCTTCCAAAAGAACGAGTAGAAGAGGTGACAAATGATGCTGAAAAGTTAAAGAGCTGGTTGGATGAGAAAGAGGCTGAGCAAAAGAAGACTTCTGGATTCAGTAAGCCAGCATTTACATCTGAAGAAGTATATATAAAGGTGTTTGATCTACAATACAAGGTTGCCAGTATTAATAGAATTCCAAAGCCCAAGCCGAAAATTCAGAAGCCTGTAAAGAACGAAACCGAGAGCAGTGAGCAGAACACAGATAATTCCAATTCTAATTCTACCTCAAGCGATCAATCCGCTAACAATTCAGAATCCCCAAGTGATGAAAAGGTTGATGAGCAACCAGAAGTTCATGATGAGTTATGA 2670 0.4285 MARLLPKLALIVSVLAFLFSPSQSAVFSVDLGTESLKVAVVNLKPGQSPISIAINEMSKRKSPALVSFHDGDRLLGEEAAGLVARYPQKVYSQIRDLIGKPYASAKNFLDSMYLPFEAIEDSRGTVSFKVDENGTVFTPEELVAMVLSYAVSLAEFHSKIPIKDAVITVPPYFGQAERKGLVQAAELAGINVLSLINEHSGAALQYGIDKDFSNGSRHVIFYDMGSSSTYAALVYFSAYKAKEYGKTVSVNQFQVKDVRWNPELGGQNMEMRLVEYFANEFNAQVGDGIDVRRFAKAMAKLKKQVKRTKEILSANTAAPISVESLHNDLDFRSTITREKFEELCEDIWEKSLLPVKEVLEHSDLSTEQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMVDGSLYGFVVELTGPDLLKDESSRQLLVPRMKKLPSKMFRSINHNKDFEVSLAYESEHHLPPGVTSPLIAQYQISGLTDTSEKYSTRNLSSPIKANIHFSVSRSGILSLDRADAVIEITEWVEVPRKNLTIENSTILSNVTDESGAKNSSEKSNESVQTDSGISKTSNISAEEQAAAEPATERKLRKRTFRVPLKIVEKITGPGMSLSKDILAEAKRKLEALDKKDAERKRTAELKNNLEGYIYTTKEKIETLEEFEKVSTSEERQSFVEKLDEVQDWLYTDGEDANATEFQERLNQLKAVGDPIFFRLKELTARPTAVEHARKYIDELKQIVQEWKANKSWLPKERVEEVTNDAEKLKSWLDEKEAEQKKTSGFSKPAFTSEEVYIKVFDLQYKVASINRIPKPKPKIQKPVKNETESSEQNTDNSNSNSTSSDQSANNSESPSDEKVDEQPEVHDEL* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00229 889 ProSitePatterns Heat shock hsp70 proteins family signature 3. 372 386 IPR018181 -
Rops10g00229 889 FunFam Heat shock 70 kDa protein 4 637 749 - -
Rops10g00229 889 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 426 609 IPR029047 -
Rops10g00229 889 Gene3D - 211 398 - -
Rops10g00229 889 MobiDBLite consensus disorder prediction 846 873 - -
Rops10g00229 889 Gene3D - 29 416 - -
Rops10g00229 889 MobiDBLite consensus disorder prediction 831 889 - -
Rops10g00229 889 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 664 747 IPR029048 -
Rops10g00229 889 Coils Coil 635 655 - -
Rops10g00229 889 CDD HYOU1-like_NBD 28 416 - -
Rops10g00229 889 Gene3D - 92 145 - -
Rops10g00229 889 Pfam Hsp70 protein 27 737 IPR013126 GO:0005524|GO:0140662
Rops10g00229 889 Gene3D - 637 753 IPR029048 -
Rops10g00229 889 PRINTS 70kDa heat shock protein signature 57 69 - -
Rops10g00229 889 PRINTS 70kDa heat shock protein signature 369 385 - -
Rops10g00229 889 PRINTS 70kDa heat shock protein signature 522 538 - -
Rops10g00229 889 PRINTS 70kDa heat shock protein signature 401 421 - -
Rops10g00229 889 PRINTS 70kDa heat shock protein signature 165 185 - -
Rops10g00229 889 PRINTS 70kDa heat shock protein signature 25 38 - -
Rops10g00229 889 Coils Coil 749 769 - -
Rops10g00229 889 FunFam Heat shock 70 kDa protein 17 426 572 - -
Rops10g00229 889 SUPERFAMILY Actin-like ATPase domain 26 210 IPR043129 -
Rops10g00229 889 MobiDBLite consensus disorder prediction 570 613 - -
Rops10g00229 889 PANTHER HSC70CB, ISOFORM G-RELATED 24 867 - -
Rops10g00229 889 SUPERFAMILY Actin-like ATPase domain 216 418 IPR043129 -
Rops10g00229 889 Gene3D Actin; Chain A, domain 4 265 350 - -
Rops10g00229 889 FunFam Heat shock 70 kDa protein 4 265 350 - -
Rops10g00229 889 MobiDBLite consensus disorder prediction 874 889 - -
Rops10g00229 889 MobiDBLite consensus disorder prediction 570 604 - -
Rops10g00229 889 Coils Coil 778 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00229 Rops-Chr10 7053493 7066470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00229 27 532 Calmodulin-binding Proteins AT1G16030 30.426 7.42e-66 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00229 K09486 - gmx:100786898 1434.08