Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g00229 | ATGGCGCGGCTTCTCCCGAAGCTAGCGTTAATCGTGTCGGTTCTCGCGTTCCTCTTCTCTCCGTCGCAATCCGCGGTTTTCAGCGTAGATCTAGGCACCGAATCGCTCAAGGTTGCGGTGGTGAACCTGAAACCCGGTCAAAGTCCGATCTCGATCGCGATCAACGAGATGTCGAAGCGAAAATCGCCGGCGCTGGTTTCTTTCCACGACGGCGATCGCCTCCTCGGCGAGGAAGCCGCCGGTCTTGTCGCTCGCTATCCACAAAAAGTGTATTCCCAAATCAGAGACCTAATAGGGAAACCCTACGCTTCCGCGAAGAACTTTCTAGATTCAATGTACTTGCCTTTCGAAGCGATTGAAGATTCTAGAGGAACCGTGAGTTTTAAAGTGGACGAAAACGGCACCGTTTTTACCCCTGAGGAATTGGTCGCGATGGTTCTGAGCTACGCCGTGAGTTTAGCGGAGTTCCATTCGAAGATTCCGATCAAAGACGCGGTGATAACTGTGCCGCCGTATTTCGGACAAGCTGAACGGAAAGGGTTGGTTCAGGCGGCGGAGTTAGCAGGGATTAATGTTCTTTCGTTGATAAACGAACATTCTGGTGCTGCGCTTCAGTATGGGATTGATAAGGACTTCTCAAATGGATCAAGGCATGTGATTTTCTATGACATGGGTTCTAGCAGTACCTATGCTGCACTTGTATATTTCTCTGCTTATAAAGCTAAAGAGTATGGGAAGACGGTGTCTGTGAACCAGTTTCAGGTCAAGGATGTCCGTTGGAACCCAGAGCTGGGTGGTCAGAATATGGAGATGAGATTGGTGGAGTATTTTGCTAATGAGTTCAATGCACAAGTTGGTGATGGAATAGATGTGAGGAGATTTGCCAAGGCTATGGCTAAATTGAAGAAACAGGTTAAACGAACAAAAGAGATTCTTAGTGCAAACACAGCAGCTCCCATTTCAGTTGAATCGCTTCATAATGACCTGGACTTCAGGAGCACAATCACCCGTGAGAAATTTGAAGAGCTCTGTGAAGATATTTGGGAAAAATCTCTTTTACCTGTGAAAGAAGTGCTGGAGCATTCAGACCTGTCAACGGAACAAATATATGCAGTGGAGTTGATTGGAGGTGCTACCAGAGTGCCAAAATTACAGGCTAAGCTTCAAGAGTTCCTTGGGAGAAAAGAACTTGATAGGCATCTTGATGCTGATGAAGCAATAGTTCTTGGTGCAGCTCTGCACGCTGCAAATTTAAGTGATGGAATCAAATTGAACCGCAAACTAGGAATGGTTGATGGTTCCTTATACGGATTTGTGGTTGAGCTGACTGGTCCTGATCTTTTGAAAGATGAAAGCTCAAGGCAGTTACTGGTACCACGAATGAAGAAACTCCCGAGTAAGATGTTCAGATCCATTAATCATAACAAAGATTTTGAAGTTTCACTAGCTTATGAAAGTGAACATCATTTGCCACCTGGTGTTACCTCTCCTTTAATTGCTCAATACCAGATATCTGGTTTGACAGATACGAGTGAGAAATACTCAACTCGGAATCTATCATCCCCCATCAAGGCAAATATACATTTCTCTGTTAGTAGAAGTGGAATTCTTTCTCTGGATCGGGCTGACGCTGTTATTGAAATAACAGAGTGGGTGGAAGTTCCTAGGAAGAATTTGACCATAGAAAATTCAACTATTTTATCAAATGTAACAGATGAATCTGGTGCTAAGAACAGTTCTGAGAAAAGCAACGAAAGTGTGCAAACTGATAGTGGGATTAGTAAGACATCAAACATTAGTGCGGAGGAGCAAGCTGCTGCTGAACCTGCTACAGAGCGAAAGCTGAGAAAGCGGACCTTTAGGGTACCATTAAAGATTGTTGAGAAGATAACAGGACCTGGGATGTCTCTATCGAAAGATATTCTTGCTGAAGCTAAAAGAAAATTAGAAGCACTAGATAAAAAAGATGCAGAAAGAAAAAGAACGGCTGAGTTAAAAAATAATTTAGAAGGATATATATATACTACCAAGGAAAAGATTGAAACTCTTGAGGAGTTTGAAAAAGTTTCTACCAGTGAGGAACGCCAGTCCTTTGTTGAGAAGCTTGATGAGGTGCAAGATTGGTTATATACAGATGGTGAAGATGCCAATGCTACAGAGTTTCAAGAGCGTCTAAATCAGTTAAAAGCTGTTGGAGATCCAATTTTCTTCAGATTAAAAGAGCTAACAGCTCGACCAACGGCAGTTGAGCATGCACGTAAATACATTGATGAGCTGAAACAGATTGTACAAGAGTGGAAAGCAAACAAGTCTTGGCTTCCAAAAGAACGAGTAGAAGAGGTGACAAATGATGCTGAAAAGTTAAAGAGCTGGTTGGATGAGAAAGAGGCTGAGCAAAAGAAGACTTCTGGATTCAGTAAGCCAGCATTTACATCTGAAGAAGTATATATAAAGGTGTTTGATCTACAATACAAGGTTGCCAGTATTAATAGAATTCCAAAGCCCAAGCCGAAAATTCAGAAGCCTGTAAAGAACGAAACCGAGAGCAGTGAGCAGAACACAGATAATTCCAATTCTAATTCTACCTCAAGCGATCAATCCGCTAACAATTCAGAATCCCCAAGTGATGAAAAGGTTGATGAGCAACCAGAAGTTCATGATGAGTTATGA | 2670 | 0.4285 | MARLLPKLALIVSVLAFLFSPSQSAVFSVDLGTESLKVAVVNLKPGQSPISIAINEMSKRKSPALVSFHDGDRLLGEEAAGLVARYPQKVYSQIRDLIGKPYASAKNFLDSMYLPFEAIEDSRGTVSFKVDENGTVFTPEELVAMVLSYAVSLAEFHSKIPIKDAVITVPPYFGQAERKGLVQAAELAGINVLSLINEHSGAALQYGIDKDFSNGSRHVIFYDMGSSSTYAALVYFSAYKAKEYGKTVSVNQFQVKDVRWNPELGGQNMEMRLVEYFANEFNAQVGDGIDVRRFAKAMAKLKKQVKRTKEILSANTAAPISVESLHNDLDFRSTITREKFEELCEDIWEKSLLPVKEVLEHSDLSTEQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMVDGSLYGFVVELTGPDLLKDESSRQLLVPRMKKLPSKMFRSINHNKDFEVSLAYESEHHLPPGVTSPLIAQYQISGLTDTSEKYSTRNLSSPIKANIHFSVSRSGILSLDRADAVIEITEWVEVPRKNLTIENSTILSNVTDESGAKNSSEKSNESVQTDSGISKTSNISAEEQAAAEPATERKLRKRTFRVPLKIVEKITGPGMSLSKDILAEAKRKLEALDKKDAERKRTAELKNNLEGYIYTTKEKIETLEEFEKVSTSEERQSFVEKLDEVQDWLYTDGEDANATEFQERLNQLKAVGDPIFFRLKELTARPTAVEHARKYIDELKQIVQEWKANKSWLPKERVEEVTNDAEKLKSWLDEKEAEQKKTSGFSKPAFTSEEVYIKVFDLQYKVASINRIPKPKPKIQKPVKNETESSEQNTDNSNSNSTSSDQSANNSESPSDEKVDEQPEVHDEL* | 890 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g00229 | 889 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 372 | 386 | IPR018181 | - | |
Rops10g00229 | 889 | FunFam | Heat shock 70 kDa protein 4 | 637 | 749 | - | - | |
Rops10g00229 | 889 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 426 | 609 | IPR029047 | - | |
Rops10g00229 | 889 | Gene3D | - | 211 | 398 | - | - | |
Rops10g00229 | 889 | MobiDBLite | consensus disorder prediction | 846 | 873 | - | - | |
Rops10g00229 | 889 | Gene3D | - | 29 | 416 | - | - | |
Rops10g00229 | 889 | MobiDBLite | consensus disorder prediction | 831 | 889 | - | - | |
Rops10g00229 | 889 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 664 | 747 | IPR029048 | - | |
Rops10g00229 | 889 | Coils | Coil | 635 | 655 | - | - | |
Rops10g00229 | 889 | CDD | HYOU1-like_NBD | 28 | 416 | - | - | |
Rops10g00229 | 889 | Gene3D | - | 92 | 145 | - | - | |
Rops10g00229 | 889 | Pfam | Hsp70 protein | 27 | 737 | IPR013126 | GO:0005524|GO:0140662 | |
Rops10g00229 | 889 | Gene3D | - | 637 | 753 | IPR029048 | - | |
Rops10g00229 | 889 | PRINTS | 70kDa heat shock protein signature | 57 | 69 | - | - | |
Rops10g00229 | 889 | PRINTS | 70kDa heat shock protein signature | 369 | 385 | - | - | |
Rops10g00229 | 889 | PRINTS | 70kDa heat shock protein signature | 522 | 538 | - | - | |
Rops10g00229 | 889 | PRINTS | 70kDa heat shock protein signature | 401 | 421 | - | - | |
Rops10g00229 | 889 | PRINTS | 70kDa heat shock protein signature | 165 | 185 | - | - | |
Rops10g00229 | 889 | PRINTS | 70kDa heat shock protein signature | 25 | 38 | - | - | |
Rops10g00229 | 889 | Coils | Coil | 749 | 769 | - | - | |
Rops10g00229 | 889 | FunFam | Heat shock 70 kDa protein 17 | 426 | 572 | - | - | |
Rops10g00229 | 889 | SUPERFAMILY | Actin-like ATPase domain | 26 | 210 | IPR043129 | - | |
Rops10g00229 | 889 | MobiDBLite | consensus disorder prediction | 570 | 613 | - | - | |
Rops10g00229 | 889 | PANTHER | HSC70CB, ISOFORM G-RELATED | 24 | 867 | - | - | |
Rops10g00229 | 889 | SUPERFAMILY | Actin-like ATPase domain | 216 | 418 | IPR043129 | - | |
Rops10g00229 | 889 | Gene3D | Actin; Chain A, domain 4 | 265 | 350 | - | - | |
Rops10g00229 | 889 | FunFam | Heat shock 70 kDa protein 4 | 265 | 350 | - | - | |
Rops10g00229 | 889 | MobiDBLite | consensus disorder prediction | 874 | 889 | - | - | |
Rops10g00229 | 889 | MobiDBLite | consensus disorder prediction | 570 | 604 | - | - | |
Rops10g00229 | 889 | Coils | Coil | 778 | 798 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g00229 | Rops-Chr10 | 7053493 | 7066470 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g00229 | 27 | 532 | Calmodulin-binding Proteins | AT1G16030 | 30.426 | 7.42e-66 | 231 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g00229 | K09486 | - | gmx:100786898 | 1434.08 |