Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00217 ATGGATACCATTGTTGAGGAATCTTTTGTTGATCTGAATGATGATGGAGATTTGAATCTGAGTCCTTGTGATGGGTCTGACAGCTCAAGTGACAAGTTTCATGAAAATGTGGAACTGAATGACGATGTTTATAAGAGAGTGACAGAGTTGAATAGAGATGAGATTTTAAATTTGGAGTTTGGAAGTGAAAATGAGGCTATAGAATTCTACAGCAAATATGCCATGTGTCATGGATTTGTTGTTAGGAAAGATGATGTGATTAGAGATTTGAAGGGAAATGTTGTAATGCGCCAATTAGTATGCAATAGAGCTGGGTTGAGAAACAAAAAACACGTTGAGAGGGTGGATAGAATAAGAGATCATAGACCTATCACACGTACTAACTGTGAAGCTAAGTTTAGGGTTCATGTTGATTACCGGACATTGAAATGGAGGGTTGCATCGTTTGAGGATACACATAATCATCTGCTTACACCATGTGAACAGGTCAGAAAGGTGGATATCCAGACTTAG 513 0.3821 MDTIVEESFVDLNDDGDLNLSPCDGSDSSSDKFHENVELNDDVYKRVTELNRDEILNLEFGSENEAIEFYSKYAMCHGFVVRKDDVIRDLKGNVVMRQLVCNRAGLRNKKHVERVDRIRDHRPITRTNCEAKFRVHVDYRTLKWRVASFEDTHNHLLTPCEQVRKVDIQT* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00217 170 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 159 - -
Rops10g00217 170 Pfam FAR1 DNA-binding domain 68 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00217 Rops-Chr10 6503941 6504562 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops10g00217 FAR1 3.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00217 - - ccaj:109792835 171.785