Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00216 ATGAAGGAAATGAACACTGAGATAGCTTGTATCCGCCTTGGAAATGTCCATGTTATCCCTGTTACATGCCCCACCATTGCACGTGAATTCTTGAGAAAACAAGATGCTTCTTTTGCATCCAGGCCTATAAGCATGTCCACTGACCTTGTTTGCAAGGGATATTTGACCACAGCCCTTGCACCCTTTGGTGAACAATGGAAGAAAATGAAAAAGATCATCACAAATGATTTGCTCTCTACCACCAAGCATCAACGGTTTCAACACAAAAGGGATGAAGAAGCTGATAACCTTATGTTTTATGTCTACAACAAATGCAAAAATGACACCCTTGTGAATGTCAGGATTGCTGCACGACATTATTGTTGTAATGTGATCAAAAAATTGTGTTTGAATACAAGGTATTTTGGAAAGGGTGGGAAATATGGAGGGCCTGGTTGTGAGGAAACAGAACATCTAGATGCTATTTTCACAATGCTCAAGCACATTTATGCCTTCTATCTTTCTGATTATATCCCATGCTTGAGGGGACTCGATTTGGATGGTCACGAAGCCAAGGTGAAAGAGGCTGTAACAATTGTGAACAAGTATCATGATCCCATCATCGAACAGAGAATCAAACAGTGGAATGATGGGTCAAAGATTGAAGTTGAGGATTTCCTTGATATTCTGATCTCACTAAAAGATGCTGACAATAACCCAATATTGACACCACAGGAAATCAAAGCTCAAATTATAGAATTGATGATTGCAGCAGTAGATAACCCGTCAAATGCAATTGAATGGGGTCTTTCAGAAATGATAAATCAGCCTGAGTTGCTTCAACGAGCCACTGAAGAATTGGACAATGTGGTAGGGAAAGAAAGACTAGTTCAAGAATCAGATATTCCTAAGCTTAACTATGTGAAGGCTTGTGCGAGAGAAGCTTTTCGTCTTCATCCCATTGTGCCTTTTAATGTTCCTCATGTTTCTATGAAAGACACAATGATTTGTAATTACCTAATTCCAAAGGGTAGTCATGTGTTGTTGAGCAGACTAGCACTTGGTCGAAACCCAAAAGTTTGGGATGAACCAAACAAGTTCAAACCAGAACGTCACCTCAAGGATGGTGGTTTTGAGGTGGTTTTGACAGAGCCAGATTTGAAGTTGATATCATTTGCCACAGGAAGGCGTAGCTGTCCTGGAATCATGCTTGGCACCACAATGACTATAATGTTATTTGCTAGGTTACTTCATGGCTTCACTTGGAGTGCACCAACTAATGTGTCAAGCATCAATCTTGGTGAGTCCAACGATGATATGTTTCTTGCTGAGCCACTAGTGGCGATAGCAAAGCCTAGGTTAGCAACAAAATTGTATCAATAG 1362 0.4046 MKEMNTEIACIRLGNVHVIPVTCPTIAREFLRKQDASFASRPISMSTDLVCKGYLTTALAPFGEQWKKMKKIITNDLLSTTKHQRFQHKRDEEADNLMFYVYNKCKNDTLVNVRIAARHYCCNVIKKLCLNTRYFGKGGKYGGPGCEETEHLDAIFTMLKHIYAFYLSDYIPCLRGLDLDGHEAKVKEAVTIVNKYHDPIIEQRIKQWNDGSKIEVEDFLDILISLKDADNNPILTPQEIKAQIIELMIAAVDNPSNAIEWGLSEMINQPELLQRATEELDNVVGKERLVQESDIPKLNYVKACAREAFRLHPIVPFNVPHVSMKDTMICNYLIPKGSHVLLSRLALGRNPKVWDEPNKFKPERHLKDGGFEVVLTEPDLKLISFATGRRSCPGIMLGTTMTIMLFARLLHGFTWSAPTNVSSINLGESNDDMFLAEPLVAIAKPRLATKLYQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00216 453 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 6 452 - -
Rops10g00216 453 Pfam Cytochrome P450 7 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00216 453 FunFam Cytochrome P450 9 1 450 - -
Rops10g00216 453 CDD CYP79 6 447 - -
Rops10g00216 453 Gene3D Cytochrome P450 1 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00216 453 SUPERFAMILY Cytochrome P450 7 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00216 453 PRINTS E-class P450 group I signature 392 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00216 453 PRINTS E-class P450 group I signature 120 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00216 453 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00216 453 PRINTS E-class P450 group I signature 239 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00216 453 PRINTS E-class P450 group I signature 259 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00216 453 PRINTS E-class P450 group I signature 382 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00216 453 PRINTS E-class P450 group I signature 302 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00216 453 PRINTS E-class P450 group I signature 343 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00216 Rops-Chr10 6497520 6499916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00216 1 452 Cytochrome P450 AT4G39950 56.071 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00216 - K14984 gmx:100779934 697.197