Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00208 ATGGGACCCTTCACTAGTCTTTTGTTGTCACACTTTCGGAGCTTGTGGTCTTCTTTGATTATTATCATAATTTATTGCCTTACCATTTTCAAAGCACTAAGTTCTCACTTGATTATCAAAAGCAGCAAACACAGTCTTCCCCCAGGTCCCAAACCATGGCCTATAGTTGGCAACCTTCCCGAAATGTTTGCAAACAAGCCTACATTCAGGTGGATACACAAGCTAATGAAAGAAATGAACACTGAAATAGCTTGTATCCGCCTTGGAAATGTCCATGTTATCCCTGTGACATGCCCCATCATTGCACGTGAATTCCTGAGAAAACAAGATGCTGATTTTGCATCCAGGCCTATAAGCATGTCCACCGACATCATCAGCAATGGTTATTTGACCACAGCTCTTGTACCCTTTGGGGAGCAATGGAAGAAAATGAAAAAGATCATCACAAATGATTTGCTCTCTACCACCAAGCATCAACGGTTTCAACACAAAAGGGATGAAGAAGCTGATAACCTTATGTTTTATGTCTACAACAAATGCAAAAATGACAACCTTGTGAATGTCAGGATTGCTGCACAACATTATTGTTGTAATGTGATCAAGAAACTGAGTTTGAATACAAGGTACTTTGGAAACGGTGCCAAGGATGGAGGGCCTGGTTCTGAGGAAGTAGAACATCTAGATGTCGTTTTCACAATGCTCAAGTACGTTTATGCCTTTTGTGTTTGTGATTATATGCCATGTTTGGGGGGATTGGACTTGGATGGTCATGAGGCCAAGGTGAAGGAGGCTATAAGAATCATGAACAAGTATCATGATCCCATCATTGAACAAAGAATCAAACAGTGGAATGATGGATCAAAGATTGAAATTGAGGATTTCCTTGATATTCTGATCTCACTGAAAGATGCCAACAATGAGCCTATGTTGACACCGCATGAAATCAAAGCGCAAATAATGGAATTGATGATTGCGACAGTGGATAACCCATCAAATGCAATTGAATGGGCACTTGCAGAAATGATAAACCAGCCCGAGTTGCTTCAACAAGCTACTGAAGAATTGGACAATGTGGTAGGGAAAGAGAGGCTGGTCCAAGAATCAGATATTCCTAAACTCAACTATGTGAAGGCTTGCGCAAGAGAAGCTTTTCGCCTTCATCCCATTGTGCCTTTTAATGTTCCTCATGTTTCTATGAAAGACACAATTGTTGCCAACTATCTAATTCCAAAGGGTAGCCATGTATTGTTAAGTAGAAGAGAACTTGGCCGAAACCCAAAAGTTTGGAATGAACCGAACAAGTTCAAACCTGAACGTCACCTCAAGAATGATGGTTCTGAGGTGGTTTTAACAGAGCCAGATTTAAGGTTCATATCATTTACTACAGGAAGGCGTGGTTGTCCTGGAGTCAAGCTTGGTACCACAATGACTGTAATGCTATTTGCAAGGTTGCTCCAAGGCTTCACTTGGAGTGCACCACCTAACGTGTCAAGCATCAACGTTGCTGAGTCCAACGATGATATGTTTCTTGCTGAGCCACTTGTGGCAGTAGCAAAGCCAAGATTAGAAGCAAAGTTGTACCAATAG 1587 0.4146 MGPFTSLLLSHFRSLWSSLIIIIIYCLTIFKALSSHLIIKSSKHSLPPGPKPWPIVGNLPEMFANKPTFRWIHKLMKEMNTEIACIRLGNVHVIPVTCPIIAREFLRKQDADFASRPISMSTDIISNGYLTTALVPFGEQWKKMKKIITNDLLSTTKHQRFQHKRDEEADNLMFYVYNKCKNDNLVNVRIAAQHYCCNVIKKLSLNTRYFGNGAKDGGPGSEEVEHLDVVFTMLKYVYAFCVCDYMPCLGGLDLDGHEAKVKEAIRIMNKYHDPIIEQRIKQWNDGSKIEIEDFLDILISLKDANNEPMLTPHEIKAQIMELMIATVDNPSNAIEWALAEMINQPELLQQATEELDNVVGKERLVQESDIPKLNYVKACAREAFRLHPIVPFNVPHVSMKDTIVANYLIPKGSHVLLSRRELGRNPKVWNEPNKFKPERHLKNDGSEVVLTEPDLRFISFTTGRRGCPGVKLGTTMTVMLFARLLQGFTWSAPPNVSSINVAESNDDMFLAEPLVAVAKPRLEAKLYQ* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00208 528 Pfam Cytochrome P450 47 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00208 528 Gene3D Cytochrome P450 38 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00208 528 CDD CYP79 81 522 - -
Rops10g00208 528 FunFam Cytochrome P450 9 39 525 - -
Rops10g00208 528 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 17 527 - -
Rops10g00208 528 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00208 528 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00208 528 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00208 528 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00208 528 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00208 528 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00208 528 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00208 528 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00208 528 SUPERFAMILY Cytochrome P450 42 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00208 Rops-Chr10 6286382 6289400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00208 21 527 Cytochrome P450 AT4G39950 56.117 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00208 - K14984 gmx:100786887 797.349