Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00206 ATGCTTGCAAACAAGCCTACATTCAAGTGGATACATAAGCTAATGAAGGAAATGAACACTGAGATAGCTTGTATCCGCCTTGGAAATGTCCATGTTATCCCTGTTACATGCCCCACCATTGCACGTGAATTCTTGAGAAAACAAGATGCTGATTTTGCATCCAGGCCTATAAGCATGTCCACTGACCTTGTTAGCAAGGGATATTTGACCACAGCCCTTGCACCCTTTGGTGAACAATGGAAGAAAATGAAAAAGATCATCACAAATGATTTGCTCTCTACCACCAAGCATCAACGGTTTCAACACAAAAGGGATGAAGAAGCTGATAACCTTATGTTTTATGTCTACAACAAATGCAAAAATGACACCCTTGTGAATGTCAGGATTGCAGCACGACATTATTGTTGTAATGTGATCAAAAAATTGTGTTTGAATACAAGGTATTTTGGAAAGGGTGGGAAATATGGAGGGCCTGGTTGTGAGGAAACAGAACATCTAGATGCTATTTTCACAATGCTCAAGCACATTTATGCCTTCTATCTTTCTGATTATATCCCATGCTTGAGGGGACTCGATTTGGATGGTCACGAAGCCAAGGTGAAAGAGGCTGTAACAATTGTGAACAAGTATCATGATCCCATCATCGAACAGAGAATCAAACAGTGGAATGATGGGTCAAAGATTGAAGTTGAGGATTTCCTTGATATTCTGATCTCACTAAAAGATGCTGACAATAACCCAATATTGACACCACAGGAAATCAAAGCTAAAATTATAGAATTGATGATTGCAGCAGTAGATAACCCGTCAAATGCAATTGAATGGGGTCTTTCAGAAATGATAAATCAGCCTGAGTTGCTTCAACGAGCCACTGAAGAATTGGACAATGTGGTAGGGAAAGAAAGACTAGTTCAAGAATCAGATATTCCTAAGCTTAACTATGTGAAGGCTTGTGCGAGAGAAGCTTTTCGTCTTCATCCTATTGTGCCTTTTAATATTCCTCATGTTTCTATGAAAGACACAATGATTTGTAATTACCTAATTCCAAAGGGTAGTCATGTGTTGTTGAGTAGACTAGCACTTGGTCGAAACCCAAAAGTTTGGGATGAACCAAACAAGTTCAAACCAGAACGTCACCTCAAGGATGGTGGTTTTGAGGTGGTTTTGACAGAGCCAGATTTGAAGTTGATATCATTTACCACAGGAAGGCGTAGTTGTCCTGGAATCATGCTTGGCACCACAATGACTATAATGTTATTTGCACCAACTAATGTGTCAAGCATCAATCTTGGTGAGTCCAATGATGATATGTTTCTTGCTGAGCCACTAGTGGCGATAGCAAAGCCTAGGTTAGCAACAAAATTGTATCAATAG 1374 0.3974 MLANKPTFKWIHKLMKEMNTEIACIRLGNVHVIPVTCPTIAREFLRKQDADFASRPISMSTDLVSKGYLTTALAPFGEQWKKMKKIITNDLLSTTKHQRFQHKRDEEADNLMFYVYNKCKNDTLVNVRIAARHYCCNVIKKLCLNTRYFGKGGKYGGPGCEETEHLDAIFTMLKHIYAFYLSDYIPCLRGLDLDGHEAKVKEAVTIVNKYHDPIIEQRIKQWNDGSKIEVEDFLDILISLKDADNNPILTPQEIKAKIIELMIAAVDNPSNAIEWGLSEMINQPELLQRATEELDNVVGKERLVQESDIPKLNYVKACAREAFRLHPIVPFNIPHVSMKDTMICNYLIPKGSHVLLSRLALGRNPKVWDEPNKFKPERHLKDGGFEVVLTEPDLKLISFTTGRRSCPGIMLGTTMTIMLFAPTNVSSINLGESNDDMFLAEPLVAIAKPRLATKLYQ* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00206 457 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 17 422 - -
Rops10g00206 457 FunFam Cytochrome P450 9 1 454 - -
Rops10g00206 457 PRINTS E-class P450 group I signature 134 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00206 457 PRINTS E-class P450 group I signature 253 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00206 457 PRINTS E-class P450 group I signature 316 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00206 457 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00206 457 PRINTS E-class P450 group I signature 273 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00206 457 PRINTS E-class P450 group I signature 396 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00206 457 PRINTS E-class P450 group I signature 357 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00206 457 Gene3D Cytochrome P450 1 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00206 457 SUPERFAMILY Cytochrome P450 5 421 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00206 457 Pfam Cytochrome P450 11 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00206 Rops-Chr10 6244616 6247024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00206 1 456 Cytochrome P450 AT4G39950 54.390 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00206 - K14984 gmx:100786887 695.656