Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00187 ATGGAAGGGTTCAAGAGAAAAAACCAGCTCCTCACTTTTTCTATCATCATCTTCCTTGTACTTCCATCTCTAGTTGTTGCAGAATGCACATGTGACCCAGAAGATGAAGACAGGGATAAAGGCAAAGCTAGAAGGTACAAAATAGCAGCTTTAGTCTCAATACTAGTTGCAAGTGCCATTGGTGTTTGTATTCCACTCCTTGGCAAAGTGATCCCTGCATTGAGTCCTGAGAAAGACATATTTTTTATCATTAAGGCCTTTGCTGCTGGTGTGATATTGGCCACTGGTTTCATTCATGTGCTTCCTGATGCCTTTGAAAACCTCACTTCCCCTTGTTTAAGTGAGCATCCATGGGGTGATTTTCCCTTCACTGGGTTTGTGGCTATGTGCACTGCCATGGGGACCCTTATGATTGATACTTATGCCACTGCTTATTTTCAGAAATACCATTCAAAGAAAGATCAAGTTGAGACCACTGATATGGAGAAGGATTCAGGGCATGTGCATCCTCACACCCACATAACACATGGTCATGCACATGGGGGACATGTTTCCTCTGATTCCTCAGAACTTGTTCGTCACCGTGTCATAGCACAGGTGTTGGAACTGGGGATTGTTGTTCACTCCGTCATTATTGGAATTTCTTTGGGAGCTTCGGAGAGTCCTAAGACAATAAGGCCATTGGTGGCTGCTTTGACTTTTCATCAGTTCTTTGAGGGCATGGGACTTGGAAGTTGCATAACTCAGGCACAATTCAAGAGTCTATCTGTTGTAATCATGGGATTGTTCTTCGCTTTAACTACTCCGCTAGGAATTGCAATTGGTATGGGGATCACTAATGTTTACGATGAAAACAGCCCAACTGCACTTATTGTGGAAGGAATCTTCAATGCAGCTTCATCTGGGATCTTAATATATATGGCACTTGTGGATCTTCTTGCAGCTGATTTCATGAATCCAAGGATGCAAAAAAGTGGTAGGCTTCAATTCGGATCCAATCTATCTCTTCTGCTTGGAGCTGGTTTAATGTCTCTTATTGCCAAATGGGCTTAA 1053 0.4283 MEGFKRKNQLLTFSIIIFLVLPSLVVAECTCDPEDEDRDKGKARRYKIAALVSILVASAIGVCIPLLGKVIPALSPEKDIFFIIKAFAAGVILATGFIHVLPDAFENLTSPCLSEHPWGDFPFTGFVAMCTAMGTLMIDTYATAYFQKYHSKKDQVETTDMEKDSGHVHPHTHITHGHAHGGHVSSDSSELVRHRVIAQVLELGIVVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCITQAQFKSLSVVIMGLFFALTTPLGIAIGMGITNVYDENSPTALIVEGIFNAASSGILIYMALVDLLAADFMNPRMQKSGRLQFGSNLSLLLGAGLMSLIAKWA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00187 350 Pfam ZIP Zinc transporter 46 347 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Rops10g00187 350 PANTHER ZINC/IRON TRANSPORTER 43 344 - -
Rops10g00187 350 NCBIfam ZIP zinc/iron transport family 31 350 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00187 Rops-Chr10 5855353 5857408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00187 27 350 Inorganic Solute Cotransporters AT3G12750 58.084 4.05e-133 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00187 K14709 - gmx:547695 532.332