Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00176 ATGGCTGAGGATAAGGAAATGTCTACCTCTGTTATCAAAGGGAATGATGCTCTCACTGGTCACATTATATCTACAACAATTGGAGGCAAAAATGGGGAACCCAAACAGACTATCAGTTACATGGCTGAGCGGGTTGTAGGAACTGGATCATTTGGAGTTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAGTCAGTGGCTATTAAGAAGGTTTTACAAGACCGAAGATATAAGAATCGTGAACTACAGTTAATGCGTGTGATGGATCATCCAAATGTGGTCTCTCTGAAACATTGTTTCTTTTCCACTACAAGTGCAGATGAACTTTTTTCAATTTGGTGA 342 0.4064 MAEDKEMSTSVIKGNDALTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGVVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRVMDHPNVVSLKHCFFSTTSADELFSIW* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00176 113 Gene3D Phosphorylase Kinase; domain 1 25 112 - -
Rops10g00176 113 Pfam Protein kinase domain 40 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00176 113 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 5 110 - -
Rops10g00176 113 ProSiteProfiles Protein kinase domain profile. 40 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00176 113 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Rops10g00176 113 FunFam Glycogen synthase kinase-3 beta 24 112 - -
Rops10g00176 113 SUPERFAMILY Protein kinase-like (PK-like) 39 105 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00176 Rops-Chr10 5569665 5570035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00176 40 98 MAP Kinase Gene Family AT2G01450 43.077 1.95e-10 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Rops10g00176 Pkinase 4.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00176 K14502 - gmx:100799582 213.772