Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00154 ATGGAACCTCTAATCCTCTTAGTCTCTTTCATGCTTTCAACTCTTGTTTACTCCTTCATTTTCCGCCCTTATTTGCACCGCCACCTCCCTCCATCTCCTCTTCTACAGCTTCCAATCATTGGCCACATGCATCTCTTGGGTCCCCTTATCCACCAATCCTTCCATCGCCTCTCCCTCCAATATGGTCCTTTATTCTCTCTTCACTTGGGTTCCGTTCTTTGTGTTGTTGCTTCCTCTCCTAAATTGGCTAAGCAACTGCTTCAAACCAACGAGCATGCCTTTAATTGTCGCATTGAATCCACTGCCATAAAACGCCTCACTTATGATTCTTCTTTGGCATTTGCACCCTACGGTGATTACTGGAGGTTCATCAAGAAGCTGAGCGTGAATGAGCTTTTGAGCTCTCGTAACATCAACAACTTCCATCACTTGATGGAACAAGAGAATCATAGCCTGATAAAGCTTTTGGCCAACAAAGCAAAAGCTTGTGAGGCTGTTAATATGACCAAGGAGTTTCTCAAATTGTCCAATAACATTATTTCTAGAATGATATTAGGGGGATCAGAGGAAGCCAGGGAAGTGGTGCGTGATGTTTCAGAAATTTTCGGAGAGTTTAATGTCTCAGATTTCATTTGGCTGTTTAAGAAACTAAATTTTCAGGGCAAGAGGATTGAGGATTTGTTTCAAAGGTTTGATACATTGGTGGAAAGAATTATGTGCAAACGTGAGCAAATGAGGAAAAATAAACGGATGGAAAATGGAGAAAGTTGGAGGGGCGAGGGTGAGATGAAAGACTTTCTGGATATTTTGTTAGATTGTGCCGAGGATGAGGGCTCTGAGGTGAAAATTACAAGGGTTCACATTAAGGCCTTAATTATGGATTTCTTCACTGCAGGAACGGATACAACGGCAATTGCAGTAGAGTGGGCATTAGTGGAGCTCATGAAGCACCCTTCGTTGCTACAACAAGCTCGGAAAGAGATCGACAATGTAGTAGGGAAAAGTAGACTAGTTGAAGAATCTGACTGTCCAAATCTTCCTTATCTCCAAGCCATTGTAAAGGAAACGTTTCGTCTACACCCACCAGTGCCTATGGTTGCAAGAAGATGCGTAGCAGAATGTAAGATTGAAAATTATGTCATCCCAGAAAACTCACTACTATTTGTGAATGCTTGGTCCATTGGAAGAGATCCAAACAATTGGGAAAACCCATTGGAGTTTCGTCCTGAAAGATTCTTAAAGCTTGGTGGTGAAGGGGATTATAGTGGACTCATAGATGTGAGGGGTCAACATTTTCAACTTTTGCCATTTGGGTCTGGAAGGAGGATGTGTCCTGGGGTATCTTATGCCATGCAGCAGGTGCCAGCATTACTTGGGGCTATCATCCAGTGCTTTGATTTTCATGTTGTGGACCCCAATGGTAAGGTTTTGAAGGGTGATGATGTAGTGATTAATATGGATGAAAAGCCAGGATTGACTGTTCCAAGGGCTCATGATCTGGTGTGTGTTCCCCTTGCAAGGACCAACTGTGGAGTACTTCAAAACCTTGGATGCTGA 1557 0.4303 MEPLILLVSFMLSTLVYSFIFRPYLHRHLPPSPLLQLPIIGHMHLLGPLIHQSFHRLSLQYGPLFSLHLGSVLCVVASSPKLAKQLLQTNEHAFNCRIESTAIKRLTYDSSLAFAPYGDYWRFIKKLSVNELLSSRNINNFHHLMEQENHSLIKLLANKAKACEAVNMTKEFLKLSNNIISRMILGGSEEAREVVRDVSEIFGEFNVSDFIWLFKKLNFQGKRIEDLFQRFDTLVERIMCKREQMRKNKRMENGESWRGEGEMKDFLDILLDCAEDEGSEVKITRVHIKALIMDFFTAGTDTTAIAVEWALVELMKHPSLLQQARKEIDNVVGKSRLVEESDCPNLPYLQAIVKETFRLHPPVPMVARRCVAECKIENYVIPENSLLFVNAWSIGRDPNNWENPLEFRPERFLKLGGEGDYSGLIDVRGQHFQLLPFGSGRRMCPGVSYAMQQVPALLGAIIQCFDFHVVDPNGKVLKGDDVVINMDEKPGLTVPRAHDLVCVPLARTNCGVLQNLGC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00154 518 Gene3D Cytochrome P450 25 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 FunFam Cytochrome P450 family protein 22 502 - -
Rops10g00154 518 Pfam Cytochrome P450 31 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Rops10g00154 518 SUPERFAMILY Cytochrome P450 30 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00154 518 CDD CYP93 62 504 - -
Rops10g00154 518 PANTHER STEROID 21-HYDROXYLASE-RELATED 15 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00154 Rops-Chr10 4739230 4742336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00154 4 507 Cytochrome P450 AT5G06900 41.973 5.20e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00154 K23179 - ag:BAA22423 777.704