Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00141 ATGGCTAGGGGTGAATTGGGAGTGCTTAATGCCCTTGATACAGCTAAGACACAATTGTACCATTTCACTGCCATCATTATAGCTGGTATGGGATTTTTCACAGATGCATATGACCTTTTCTGCATCCCAAATGTTACCAAGTTGCTTGGAAGAATATACTACACAAAAGAAGGTGCACTAAAGCCTGGAACCTTGCCTCCAAACGTGTCAGCTGCAGTTAATGGTGTTGCACTTTGTGGCACTCTAGCAGGCCAACTTTTCTTTGGTTGGCTTGGTGACAAACTTGGTAGGAAAAAGGTTTATGGCATAACACTTGCCCTTATGGTCATTTCCTCTCTTGCCTCTGGCCTCTCTTTTGGCCACGAAGCAAAGGGTGTCATAGCCACACTTTGTTTCTTCAGGTTCTGGCTTGGTTTTGGAATTGGTGGTGACTACCCTCTCTCAGCTACCATCATGTCAGAATATGCAAACAAAAAGACTCGTGGGGCTTTCATAGCTTCAGTCTTTGCTATGCAAGGCTTTGGAATCTTGGCTGGTGGGATTGTTTCCCTCATTGTTTCAAGTGCATTTGATCATGCATATAGCGCTCCAGCATATAAGGATGATCATAAAGCATCTCTTGTGCCTGAAGCTGATTATGTTTGGCGCATAATTTTAATGTTTGGTGCTGTGCCTGCTGCTTTAACCTATTACTGGCGTATGAAAATGCCTGAGACAGCAAGGTACACAGCACTTGTTGCAAAGAATGCAAAACAAGCAGCACAAGACATGTCAAAGGTGTTACAAGTAGAACTTGAAGCTGAACAAGAGAAGGTAGACGAAATAAGTGTCAGAGATGAAAACAACTTTGGTTTGTTTACTAAGGAATTTGCTCGTAGACATGGCCTTCACTTGCTTGGAACCACTACCACTTGGTTTCTTCTTGACATTGCTTACTATAGTTCAAACCTTTTCCAGAAAGACATTTACAGCAGTATTGGGTGGCTTCCTCCTGCTGCAGAAATGAATGCACTTCAAGAAGTTTATAGGGTTGCTAGAGCAACAACACTTATAGCACTTTGTGGAACTGTGCCAGGTTACTGGTTCACAGTGGCCTTGATAGATATCTTGGGTCGTTTCTTCATCCAACTCATGGGTTTCTTCTTCATGACAGTTTTCATGTTTGCACTTGCCATTCCATATCATCACTGGACCAAGAAAGAGAACAGAATTGAGTTTCTTGTCATGTATGCATTCACCTTTTTCTTTGCCAATTTTGGTCCAAACTCCACCACTTTTGTTGTGCCTGCAGAGATTTTCCCTGCAAGGTTGAGGTCTACATGCCATGGTATATCCGCTGCTGCAGGGAAAGCTGGAGCTATTGTGGGTGCATTTGGGTTTTTGTATGCTTCCCAAGACAAGGATAAAGCAAAGAGAGATGCAGGGTACCCTGCTGGTATTGGCATGAAGAACACTCTTATTTTGCTTGCTGTGACCAATTGTCTTGGCATGTTTTTCACTTTCTTGGTGCCAGAATCTAAAGGGAAATCATTGGAAGAGTTGAGTGGAGAGAATGAAGATGAAGGTGATGAAATTGCTGAGCAAGAAGCCTCTGTTAGTAGGACTGTTCCTGTGTGA 1617 0.4298 MARGELGVLNALDTAKTQLYHFTAIIIAGMGFFTDAYDLFCIPNVTKLLGRIYYTKEGALKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLALMVISSLASGLSFGHEAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIASVFAMQGFGILAGGIVSLIVSSAFDHAYSAPAYKDDHKASLVPEADYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAAQDMSKVLQVELEAEQEKVDEISVRDENNFGLFTKEFARRHGLHLLGTTTTWFLLDIAYYSSNLFQKDIYSSIGWLPPAAEMNALQEVYRVARATTLIALCGTVPGYWFTVALIDILGRFFIQLMGFFFMTVFMFALAIPYHHWTKKENRIEFLVMYAFTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYASQDKDKAKRDAGYPAGIGMKNTLILLAVTNCLGMFFTFLVPESKGKSLEELSGENEDEGDEIAEQEASVSRTVPV* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00141 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 511 - -
Rops10g00141 538 Coils Coil 511 531 - -
Rops10g00141 538 Gene3D MFS general substrate transporter like domains 20 265 IPR036259 -
Rops10g00141 538 Gene3D MFS general substrate transporter like domains 275 532 IPR036259 -
Rops10g00141 538 MobiDBLite consensus disorder prediction 512 538 - -
Rops10g00141 538 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Rops10g00141 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Rops10g00141 538 FunFam Inorganic phosphate transporter 1-6 20 529 - -
Rops10g00141 538 Coils Coil 251 271 - -
Rops10g00141 538 Pfam Sugar (and other) transporter 27 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops10g00141 538 NCBIfam phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Rops10g00141 538 CDD MFS_PhT 25 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00141 Rops-Chr10 4392945 4394847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00141 1 538 Inorganic Solute Cotransporters AT2G32830 77.491 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00141 K08176 - rcu:8285033 863.988