Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00132 ATGGCTGATTCAGGCTCAGTTTCTTCCAAGAGAATGTGGTGTTCCATCCCTGAAAGATTTCAGCTGCATGCGGCCATGTTGGCCCTGCAGTTTGGTTATGCTGGGTTTCGTGTGGTCTCAAGAGCTGCACTTAACATGGGAGTTAGCAAACTTGTGTTCCCAGTCTATAGGAACATCATTGCTTTGCTTATGCTCCTTCCCTTTGCCTACTTCTTGGAAAAGAAAGGTAGTCCAGCGGTTACTTTAAACTTCCTATGTCAGTTCTTTCTTCTGGCACTTGTTGTGATTACAGCAAACCAAGGTTTCTACTTGCTTGGCTGGGATAGTACGTCCCCTACCTTCGCATCAACAATACAGAACTCCGTCCTTGCCATTACATTTCTCATGGCAGCCATATTCAGGATTGAGCAAGGGAGGCTGAATAGAAAGCAAGGAGGCATGGGCTACGTCAAGTTCAAGGAGAGTACATCACGCTTGTTTGCTACTGCTTCCTCGAGGAACTGA 504 0.4643 MADSGSVSSKRMWCSIPERFQLHAAMLALQFGYAGFRVVSRAALNMGVSKLVFPVYRNIIALLMLLPFAYFLEKKGSPAVTLNFLCQFFLLALVVITANQGFYLLGWDSTSPTFASTIQNSVLAITFLMAAIFRIEQGRLNRKQGGMGYVKFKESTSRLFATASSRN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00132 167 PANTHER WAT1-RELATED PROTEIN 24 144 IPR030184 GO:0016020|GO:0022857
Rops10g00132 167 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 134 - -
Rops10g00132 167 Pfam EamA-like transporter family 27 134 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00132 Rops-Chr10 4130886 4132416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00132 1 145 Nodulin-like Gene Family AT1G75500 73.793 1.58e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00132 - - gmx:100792395 244.588