Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00125 ATGATTTGTGGTTGTAACAAGATGGATGCTACTACACCCAAGTACTCTAAGACTAGATATGATGAGATTGTGAAGGAAGTCTCGTCCTACTTGAAGAAGGTTGGATACAACCCTGATAAGATTCTTTTTGTTCCCATTTCTGGTTTTGAGGGAGACAACATGATCGAGAGGTCCACAAACCTTGGCTGGTACAAGGGTCCTACCCTTCTTGAGGCACTTGACCAGAACAATGAGCCCGAGAGACCACAACTAGTAGAAGGAAACTTGCAACTCTTCTCTGTGGAACATGCAGCATAG 297 0.4411 MICGCNKMDATTPKYSKTRYDEIVKEVSSYLKKVGYNPDKILFVPISGFEGDNMIERSTNLGWYKGPTLLEALDQNNEPERPQLVEGNLQLFSVEHAA* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00125 98 PANTHER TRANSLATION FACTOR 1 83 - -
Rops10g00125 98 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 81 IPR027417 -
Rops10g00125 98 Gene3D - 4 78 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00125 Rops-Chr10 3986601 3986897 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00125 1 82 Eukaryotic Initiation Factors Gene Family AT1G07930 91.463 2.17e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00125 K03231 - fve:101312223 160.229