Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00124 ATGCTGGCTAGGTCTTTTCCTTTGGTTTTGGTTCCCCTGGTGTTTGTTGTTGTTGTTTCTCCTAGCTTTCAAGAGTTGGAGGAGAATAAGTCTTCTTCTGAGGCTCTGAGTGGCATGAATTCTCAGCATCAGGGCTATGGTGGTGGGTTGCCACCTCACTATCCGAGACATGGTTCTGTTACTTCCAGTTCTGCCTTTGATGGTTCCTATGGGTTGCGAGCTGCTCGTCATCGTGGAAAGGTGAAGGCCTTCCCAAAAGATGATCCTAGTAAACCATGCAGATTGACTGCCTTTGTGGGCTACAAGGCTGGGATGACTCACATTGTTAGAGAGTTTGAGAAGCCTGGATCAAAGCCTCATAAGAAAGAGACATGTGAGGCTGTTACTATCATTGAAGCTCCACCATTGGTTGTTGTTGGAGTGGTGAGTTATGTGAAGACACCTCGTGGCCTTCGCACTCTGAATACCGTTGGGCTCCGCATTTAA 486 0.4753 MLARSFPLVLVPLVFVVVVSPSFQELEENKSSSEALSGMNSQHQGYGGGLPPHYPRHGSVTSSSAFDGSYGLRAARHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTHIVREFEKPGSKPHKKETCEAVTIIEAPPLVVVGVVSYVKTPRGLRTLNTVGLRI* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00124 161 Gene3D Translation factors 96 134 - -
Rops10g00124 161 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 34 157 IPR045077 GO:0003735|GO:0005840|GO:0006412
Rops10g00124 161 Gene3D Ribosomal protein L3, domain 3 55 95 IPR044892 -
Rops10g00124 161 MobiDBLite consensus disorder prediction 30 58 - -
Rops10g00124 161 Gene3D - 135 157 - -
Rops10g00124 161 Pfam Ribosomal protein L3 73 157 IPR000597 GO:0003735|GO:0005840|GO:0006412
Rops10g00124 161 MobiDBLite consensus disorder prediction 30 44 - -
Rops10g00124 161 SUPERFAMILY Translation proteins 71 158 IPR009000 -
Rops10g00124 161 FunFam 60S ribosomal protein L3 96 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00124 Rops-Chr10 3932304 3932943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00124 54 157 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 73.148 2.56e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00124 K02925 - vvi:100260533 158.303