Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00097 ATGTATGGTGGTGAATCTGAATCTGAGAACAGTGACAGGCATCTTCCTCATGATGAGTTCAAGCAAACGGAAGAGAGTTATCAGTTGCAATCTGCACTTGCACTTCGACTTTCCTCTTACTCTGCTTCTACTGGTGACCCCAATTTCTTGGACTTGGAACCCAACTCTTTCGATTCCGATTCTGCGCTCGCACTCTCCCAACGTTTTTGGGTAAATGGTTATTTGCAATACTCTGACAAAGTTCTAGATGGCTTTTACCTTATCCATGGGATGGATGCGTATACATGGACTATAAGTACTGATCAGCAGAATGTTGGTATGATTCCATCATTTGAATCACTGATGTCAGTTAAACCTTGTGATGACTCGTCAATTGTCGTGGTTGCTATTGATAAATCTAGAGATCCTGGTTTGAGAGAACTGCAAAGTAGGGTAGTAAGTCTTGCAAGTAACTGGATTACTACGAAAGATGCAACTGATCAGCTTGCAAATCTTGTTTATAGTAGGATGGGGGGAGGATCTTCAACTGAGGAAAATTTAGGTACAAGCTGGAAGGAATGCACCCAAATTCTTAAAAGCTGCCTGCATTCTGTCATTCTTCCAATTGGAAGCTTACCTGTTGGCCTTTGTGTCCATCGAGCATTGCTGTTTAAAGTGTTAGCTGACTTAATCAACCTACCATGCCGAATTGCTAAGGGCTGCAAGTATTGTAAGAAGGACGTGGGTGCTTCTTGTATAGTGCAATTTAGTTCTGACAGGGAGTATATGATTGATTTAGTAGGAAGGCCTGGGGCAACATGCCAACCCGACTCTTCACTGAATTCTGCATCTTCAATGTTGATCCCTTCACCATTATGTCATCCAAAGTTCAAGCCAATTGAATCAGCTGCATATACAAAGACATTAGCCCAGTTATATTTCTTGGACAGTCAGGCATTACAGCTTGTATTTGATACCACTTCAGGGGGTACTGTTGATTGTAGTGACAGAATGGATCTACAACGAACTGAAATGTTTGGTGCAAACTGTGCTGGAGGGAACAACCATCTTATTGCTTTGAGTCCCAGTACAGAGGAATATATGTCTTTCAATGAAGCAAACGAGTCAGTAATTGATTATCCAAGTCATGAAGTTGACCTTGATGAGGAGTATCTGGACATTCCATGGAGTGAACTTATTTTGAAGGAGAATATTGGGACAGGGTCATTTGGAACTGTCCTTCGTGCGGACTGGCGTGGTTCCGATGTTGCTGTGAAGATTCTTAAGGTGCAAGGTTTTGATTCTGAACAAGTTGAAGAATTTCTAAAGGAGATCTCACTCATGAAGCGTCTACGTCATCCAAACATTGTACTTCTAATGGGTGCAGTTATTCAACCCCCAAAGTTATCAATAGTAACAGAATATTTATCAAGAGGCAGCTTGTATGAACTTCTGCATATGCCCAGTGTTGGATCATCACTCAGTGAGAGGCGTCGTTTGAGTATGGCATATGATGTGGCAAGTGGAATGAATTATCTTCATCAAATGAGACCTCCCATTGTTCATAGAGATTTGAAGTCTCCAAATCTCTTGGTTGATGATTCATACACTGTTAAGGTATGTGACTTTGGCCTTTCACGTACAAAGGCAAACACATTTCTTTCATCTAAAACAGCAGCTGGGACTCCTGAATGGATGGCACCAGAAGTCATCCGAGGTGAACCATCAAATGAAAAATGTGATGTATTCAGCTTTGCTGTAATCTTGTGGGAACTAGTGACCCTGCAACAACCATGGAGACACTTAAATACTTCACAGGTTGTTGAAGCTGTTGGTTTTATGGGCAAACGACTAGACATGCCAAGGCATGTGAATCCTCAAGTGGCTTCCTTGATTGAGCTCTGCTGGTCTGATGAACTCTGGAGACGGCCTTCTTTCTCCGATGTTATGAAATGTTTGCAAAAAATAATTGCTGATGCTGAAGGGTGA 1968 0.4187 MYGGESESENSDRHLPHDEFKQTEESYQLQSALALRLSSYSASTGDPNFLDLEPNSFDSDSALALSQRFWVNGYLQYSDKVLDGFYLIHGMDAYTWTISTDQQNVGMIPSFESLMSVKPCDDSSIVVVAIDKSRDPGLRELQSRVVSLASNWITTKDATDQLANLVYSRMGGGSSTEENLGTSWKECTQILKSCLHSVILPIGSLPVGLCVHRALLFKVLADLINLPCRIAKGCKYCKKDVGASCIVQFSSDREYMIDLVGRPGATCQPDSSLNSASSMLIPSPLCHPKFKPIESAAYTKTLAQLYFLDSQALQLVFDTTSGGTVDCSDRMDLQRTEMFGANCAGGNNHLIALSPSTEEYMSFNEANESVIDYPSHEVDLDEEYLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDSEQVEEFLKEISLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLHMPSVGSSLSERRRLSMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGEPSNEKCDVFSFAVILWELVTLQQPWRHLNTSQVVEAVGFMGKRLDMPRHVNPQVASLIELCWSDELWRRPSFSDVMKCLQKIIADAEG* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00097 655 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 123 649 - -
Rops10g00097 655 Pfam Protein tyrosine and serine/threonine kinase 393 646 IPR001245 GO:0004672|GO:0006468
Rops10g00097 655 Pfam Ethylene-responsive protein kinase Le-CTR1 63 265 - -
Rops10g00097 655 MobiDBLite consensus disorder prediction 1 23 - -
Rops10g00097 655 SMART serkin_6 392 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00097 655 PRINTS Tyrosine kinase catalytic domain signature 466 479 IPR001245 GO:0004672|GO:0006468
Rops10g00097 655 PRINTS Tyrosine kinase catalytic domain signature 617 639 IPR001245 GO:0004672|GO:0006468
Rops10g00097 655 PRINTS Tyrosine kinase catalytic domain signature 507 525 IPR001245 GO:0004672|GO:0006468
Rops10g00097 655 PRINTS Tyrosine kinase catalytic domain signature 573 595 IPR001245 GO:0004672|GO:0006468
Rops10g00097 655 PRINTS Tyrosine kinase catalytic domain signature 554 564 IPR001245 GO:0004672|GO:0006468
Rops10g00097 655 CDD STKc_MAP3K-like 398 644 - -
Rops10g00097 655 Gene3D Transferase(Phosphotransferase) domain 1 471 654 - -
Rops10g00097 655 FunFam Serine/threonine-protein kinase CTR1 471 655 - -
Rops10g00097 655 MobiDBLite consensus disorder prediction 7 23 - -
Rops10g00097 655 ProSiteProfiles Protein kinase domain profile. 392 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00097 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Rops10g00097 655 FunFam Serine/threonine-protein kinase isoform 1 382 470 - -
Rops10g00097 655 Gene3D Phosphorylase Kinase; domain 1 385 470 - -
Rops10g00097 655 SUPERFAMILY Protein kinase-like (PK-like) 373 646 IPR011009 -
Rops10g00097 655 ProSitePatterns Protein kinases ATP-binding region signature. 398 419 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00097 Rops-Chr10 2938919 2967106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00097 21 653 MAP Kinase Kinase Kinase AT5G03730 56.687 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Rops10g00097 PK_Tyr_Ser-Thr 9.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00097 K14510 - gmx:100807496 1078.54