Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00094 ATGGCAATGAAGCCATCAACTAACATTTGGATTCAACGCCAACAATGTCCGTGTGGAGATTGGAAGTGTTTTATCAAGTATGATGGAGATGATTATATGTCTCTGAGCTCGCAACCTGCAAATAGTAAGAGGTTGCTTTCAACAGAAGCTGTATTCACTCCTTATGTGGGTCAAATATTCAAAAGTGATGATGATGCTTTTAAACATTACAGCAGTTTTGCCCGGAAGAATGGATTTTCCATCCGAAAAGCACGCTCCACTGAGAGTCAAAATTTAGGAATATATAGACGAGACTTTGTTTGTTACAGGTCAGGATTTAATCAACCCAGGAAAAAGACCAATGTAGAGCATCACAGGGAGCGCAAATCTGTGAGGTGTGGATGTGATGCAAAATTGTACTTGACTAAGGAAATTGTTGATGGTGGTGCTCAATGGTATGTATCACAGTTCAGTAATATCCATAACCATGAGTTGTTGGAAGATGACCAAGTACGTCTACTTCCGGCATATCGGAAGATACAAGAGGCTGATCAAGAACGCATTCTTCTACTCTCCAAGGCCGGGTTCCCTGTGAACCGTATCGTGAAGGTGTTGGAGCTGGAAAAAGGAGTTCAACCTGGAAGGCTGCCTTTCATAGAGAAGGATGTTAGGAATTTCGTTCGGACCTGCAAGAAGGTAGTTCAAGAAAATGATGCTCTGCTCAATGAAAAGAGAGAGAATGATATGCAAGAACTTGTAGAGGTCTGTAAGGCAATGATAGACAGGGATCCCAATTTCATTTATGATTACACTACAGATGAAAATGGTAAAGCTGAAAATATAGCTTGGTCATATGGTGAATCCATACATGCATACACAGTTTTTGGTGATGTAGTTACTTTGGACACCACATACCGTTCTGCCACTTATGGATTACTTCTTGGATTGTTGTTTGGTATGGATAATAATGGCCATGCGATATTATTTGGGTGTGTTCTGTTACAAGATGAAAGTTCTAGTGCATATGGATGGGCTTTACAGACTCTTGTTCGGTTTATGAGAGGAAGACATCCACAGACAATTTTAACTGACATTGATCCTGCTCTAGGAGATGCTATAGCCAAGGAGTTGTCTGAAACTAAACATGTTATATTCACTTGGCATATTCTATCAAAAATATCAAGTTGGTTCTCTATTCCACTGGGATCACAATATGTGGGTTTTAGGGCAGATTTTGATGTATTGTGTCATCTCGAGAGCATAGAAAATTTTGAGCAGCAATGGGATCTTTTCATTTCTCGCTTTGGACTTACTTCAGATAAGCATATGGCTTTGTTGTTCTCATTTCGAGAATCCTGGCCAGTAGCTTATATTAGAAGTTATTTTGTAGCCCGTTTGTTGACAGATGAATTTTCACAATCTTTGGATTCATTCTTAAATGGAATTTTGAATGAACAAATATGTCTACAAGGATTCTTTGAGCAGGTTAGTTTTGTTGCCAACTCCTCAAGGTTAACAACAGAGAGGATGCACTACACCCATGTAAAGCCATGCATGCCTATTGAAGAGCATGCGAGGAGTATTCTTACACCTTATTCCTTTAATGTGATGCAAAATGAGATTTTGCTGTCAATGCAATATGCAATGACAGAACTGTCCAATGGATCATACCTTCTTCAGCACTACAAAAAAATGGACGTAGAATGTCTTGTAATTTGGGTTCCAGATGATGAGCAAATTCATTGTTCTTGTAAAGAATTTGAACATTCAGGAATTTTGTGCAGGCATTCCATTCGTGTACTTGTAGGGAAGAACTACTTTCAACTGCCTCTAAAATACTTACTCAAACGCTGGAGACAAGAGAGTTCAGTAGTCCCTATGGATGATGGTGATCAACACCCTCAAAGTAATGATGATGAGTGTGCTCAAGCCTTTCAATCTGTTGCAACAACTTTGCCTACAGAATCATTGATCTCTAAGGAATGA 1965 0.3929 MAMKPSTNIWIQRQQCPCGDWKCFIKYDGDDYMSLSSQPANSKRLLSTEAVFTPYVGQIFKSDDDAFKHYSSFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKTNVEHHRERKSVRCGCDAKLYLTKEIVDGGAQWYVSQFSNIHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGRLPFIEKDVRNFVRTCKKVVQENDALLNEKRENDMQELVEVCKAMIDRDPNFIYDYTTDENGKAENIAWSYGESIHAYTVFGDVVTLDTTYRSATYGLLLGLLFGMDNNGHAILFGCVLLQDESSSAYGWALQTLVRFMRGRHPQTILTDIDPALGDAIAKELSETKHVIFTWHILSKISSWFSIPLGSQYVGFRADFDVLCHLESIENFEQQWDLFISRFGLTSDKHMALLFSFRESWPVAYIRSYFVARLLTDEFSQSLDSFLNGILNEQICLQGFFEQVSFVANSSRLTTERMHYTHVKPCMPIEEHARSILTPYSFNVMQNEILLSMQYAMTELSNGSYLLQHYKKMDVECLVIWVPDDEQIHCSCKEFEHSGILCRHSIRVLVGKNYFQLPLKYLLKRWRQESSVVPMDDGDQHPQSNDDECAQAFQSVATTLPTESLISKE* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00094 654 Pfam MULE transposase domain 291 384 IPR018289 -
Rops10g00094 654 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 635 IPR031052 GO:0006355
Rops10g00094 654 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
Rops10g00094 654 Pfam SWIM zinc finger 567 594 IPR007527 GO:0008270
Rops10g00094 654 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Rops10g00094 654 SMART 26again6 573 600 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00094 Rops-Chr10 2842885 2846874 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops10g00094 MULE 2.2e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00094 - - cave:132180319 1057.74