Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00081 ATGCCACAGAATGATATACAAGTCGTGTTGCATGTGCGAAGGAATGCACAAAATGCTGGCTACAAAGCTGCAATTGTTAATGATAATGAAGATGGTGGTGTCTTGGTTGCAAGAAATTCTGCTGGTATAAGAATTCACGCCGTATTTGTATTGAAAGCTTCGGGTGAAATACTAAAAGAATATGCTGGGTTGACTAAGGTGGAAATATGGTTCATTCCAACTTTTGAAAACTCGGCATGGTCTATTATGGCTATTTCATTTATTTCCTTACTAGCTATGTCTGCAGTGCTTGCCACTTGTTTCTTCGTCCGCGGGCTTCGCATTAGAAGAGAAAGGCCTCAAGCTTCTCGTGTTCGTGAGTTTCATGGTATGAGCAGTCGCCTTGTGAAAGCAATGCCAAGTTTGATATTTACTTCTGCTTTGGAAGATAACTCTACATCAAGAACAGGTGATATCTGCCTTGAAGATTATTGTGTTGGAGAGAAGCTCAGGATTCTGCCCTGCTGTCACAAGTTTCATGCTGTCGGTGTGGACTCTTGGCTTACATCATGGAGAACCTTTTGTCCAGTTTGCAAATGTGATGCGAGAACTGCCCTAACTGATCCACCACCTTCAGAATCCACACCTCTACTATCATCAAGCCCAGCATCTGTGGCTTCCTCTGTCATATCTTCTTCGAGGTCATCATTAGCTTCATCTCCAAGAATACGAATTGCCCGTCCAACACAGTCTTCATCTGTTTCTCATAGCCACTCTTTAGCTAGTACCCCTTGTCTTCAACCATCTTTTAGGTCCTACTATCAATCCCCTTCCCTAAGCATCAGCAGAAGCTCTGTAGATCTTAGAAATGCATCCCAAAGATCTCTAGCTTCTCACTTGAATTCACCACATTCCATGGGATACCCTTCTTTGTCATCCCTTAACTCCAGGTACATGTCTCCGCACATTCCAAGTCCAAGCAATGCTTCAGCAAGTTTCATTGGTTCATCCAGTCACCGCCAACATCCACTACCTCAAATGGGTGAGGCTTGTTCTTGTGGACCTTACTACACGTGGGATCCAACATGA 1068 0.4373 MPQNDIQVVLHVRRNAQNAGYKAAIVNDNEDGGVLVARNSAGIRIHAVFVLKASGEILKEYAGLTKVEIWFIPTFENSAWSIMAISFISLLAMSAVLATCFFVRGLRIRRERPQASRVREFHGMSSRLVKAMPSLIFTSALEDNSTSRTGDICLEDYCVGEKLRILPCCHKFHAVGVDSWLTSWRTFCPVCKCDARTALTDPPPSESTPLLSSSPASVASSVISSSRSSLASSPRIRIARPTQSSSVSHSHSLASTPCLQPSFRSYYQSPSLSISRSSVDLRNASQRSLASHLNSPHSMGYPSLSSLNSRYMSPHIPSPSNASASFIGSSSHRQHPLPQMGEACSCGPYYTWDPT* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00081 355 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 110 197 - -
Rops10g00081 355 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 74 207 - -
Rops10g00081 355 Pfam Ring finger domain 152 192 IPR001841 -
Rops10g00081 355 Gene3D - 13 71 - -
Rops10g00081 355 SUPERFAMILY RING/U-box 152 204 - -
Rops10g00081 355 MobiDBLite consensus disorder prediction 233 254 - -
Rops10g00081 355 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 197 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00081 Rops-Chr10 2575682 2576856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00081 14 332 C3H Transcription Factor Family AT1G22670 46.061 4.52e-76 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00081 K15692 - gmx:100791248 458.759